RNA–Protein interactions for RNA: ENST00000533969.1

RPS13-209, Transcript of ribosomal protein S13, humanhuman

TSL 3

Gene RPS13, Length 355 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-209ENST00000533969 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
RPS13-209ENST00000533969 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
RPS13-209ENST00000533969 ABCC9O60706 1549 aa29.87■■■□□ 2.37
RPS13-209ENST00000533969 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
RPS13-209ENST00000533969 NACADO15069 1562 aa28.45■■■□□ 2.15
RPS13-209ENST00000533969 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
RPS13-209ENST00000533969 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
RPS13-209ENST00000533969 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
RPS13-209ENST00000533969 DCAF1Q9Y4B6 1507 aa27.93■■■□□ 2.06
RPS13-209ENST00000533969 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.06
RPS13-209ENST00000533969 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
RPS13-209ENST00000533969 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
RPS13-209ENST00000533969 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.03
RPS13-209ENST00000533969 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
RPS13-209ENST00000533969 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
RPS13-209ENST00000533969 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
RPS13-209ENST00000533969 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
RPS13-209ENST00000533969 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
RPS13-209ENST00000533969 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
RPS13-209ENST00000533969 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
RPS13-209ENST00000533969 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
RPS13-209ENST00000533969 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
RPS13-209ENST00000533969 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
RPS13-209ENST00000533969 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
RPS13-209ENST00000533969 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
RPS13-209ENST00000533969 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
RPS13-209ENST00000533969 BAZ1BQ9UIG0 1483 aaKnown RBP25.99■■□□□ 1.75
RPS13-209ENST00000533969 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
RPS13-209ENST00000533969 NESP48681 1621 aa25.74■■□□□ 1.71
RPS13-209ENST00000533969 WIZO95785 1651 aa25.68■■□□□ 1.7
RPS13-209ENST00000533969 CUX2O14529 1486 aa25.64■■□□□ 1.69
RPS13-209ENST00000533969 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
RPS13-209ENST00000533969 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
RPS13-209ENST00000533969 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
RPS13-209ENST00000533969 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
RPS13-209ENST00000533969 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
RPS13-209ENST00000533969 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
RPS13-209ENST00000533969 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
RPS13-209ENST00000533969 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
RPS13-209ENST00000533969 CFTRP13569 1480 aa25.28■■□□□ 1.64
RPS13-209ENST00000533969 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
RPS13-209ENST00000533969 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
RPS13-209ENST00000533969 CEP164Q9UPV0 1460 aa25.19■■□□□ 1.62
RPS13-209ENST00000533969 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
RPS13-209ENST00000533969 WDR62O43379 1518 aa25.13■■□□□ 1.61
RPS13-209ENST00000533969 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
RPS13-209ENST00000533969 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
RPS13-209ENST00000533969 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
RPS13-209ENST00000533969 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
RPS13-209ENST00000533969 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
RPS13-209ENST00000533969 IFT140Q96RY7 1462 aa24.7■■□□□ 1.54
RPS13-209ENST00000533969 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
RPS13-209ENST00000533969 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
RPS13-209ENST00000533969 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
RPS13-209ENST00000533969 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
RPS13-209ENST00000533969 TARBP1Q13395 1621 aaKnown RBP24.48■■□□□ 1.51
RPS13-209ENST00000533969 SOGA1O94964 1423 aa24.46■■□□□ 1.51
RPS13-209ENST00000533969 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.57e-12■■■■■ 39.2
RPS13-209ENST00000533969 EIF4G3O43432 1585 aaKnown RBP24.43■■□□□ 1.5
RPS13-209ENST00000533969 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
RPS13-209ENST00000533969 CUX1P39880 1505 aa24.42■■□□□ 1.5
RPS13-209ENST00000533969 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
RPS13-209ENST00000533969 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
RPS13-209ENST00000533969 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
RPS13-209ENST00000533969 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
RPS13-209ENST00000533969 FBLN2P98095 1184 aa24.26■■□□□ 1.47
RPS13-209ENST00000533969 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
RPS13-209ENST00000533969 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
RPS13-209ENST00000533969 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.462e-9■□□□□ 10.3
RPS13-209ENST00000533969 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
RPS13-209ENST00000533969 CHD1O14646 1710 aa24.16■■□□□ 1.46
RPS13-209ENST00000533969 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
RPS13-209ENST00000533969 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
RPS13-209ENST00000533969 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
RPS13-209ENST00000533969 RIMBP3CA6NJZ7 1639 aa24.12■■□□□ 1.45
RPS13-209ENST00000533969 RIMBP3BA6NNM3 1639 aa24.12■■□□□ 1.45
RPS13-209ENST00000533969 RIMBP3Q9UFD9 1639 aa24.12■■□□□ 1.45
RPS13-209ENST00000533969 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
RPS13-209ENST00000533969 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
RPS13-209ENST00000533969 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
RPS13-209ENST00000533969 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
RPS13-209ENST00000533969 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
RPS13-209ENST00000533969 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
RPS13-209ENST00000533969 PBRM1Q86U86 1689 aa24■■□□□ 1.43
RPS13-209ENST00000533969 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
RPS13-209ENST00000533969 CLASP1Q7Z460 1538 aa23.95■■□□□ 1.43
RPS13-209ENST00000533969 ARAP1Q96P48 1450 aa23.89■■□□□ 1.42
RPS13-209ENST00000533969 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
RPS13-209ENST00000533969 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
RPS13-209ENST00000533969 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
RPS13-209ENST00000533969 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
RPS13-209ENST00000533969 NUP160Q12769 1436 aa23.78■■□□□ 1.4
RPS13-209ENST00000533969 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
RPS13-209ENST00000533969 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
RPS13-209ENST00000533969 IGF1RP08069 1367 aa23.68■■□□□ 1.38
RPS13-209ENST00000533969 TRHP20396 242 aaPredicted RBP23.61■■□□□ 1.37
RPS13-209ENST00000533969 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
RPS13-209ENST00000533969 ERCC6L2Q5T890 1561 aa23.6■■□□□ 1.37
RPS13-209ENST00000533969 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
RPS13-209ENST00000533969 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms