RNA–Protein interactions for RNA: ENST00000591160.1

NDUFA11-203, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

TSL 3

Gene NDUFA11, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-203ENST00000591160 NISCHQ9Y2I1 1504 aa47.99■■■■■ 5.27
NDUFA11-203ENST00000591160 CCDC180Q9P1Z9 1646 aa42.76■■■■■ 4.44
NDUFA11-203ENST00000591160 ABCC9O60706 1549 aa41.57■■■■■ 4.25
NDUFA11-203ENST00000591160 RB1CC1Q8TDY2 1594 aa40.15■■■■■ 4.02
NDUFA11-203ENST00000591160 NACADO15069 1562 aa40.11■■■■■ 4.01
NDUFA11-203ENST00000591160 ZCCHC6Q5VYS8 1495 aaKnown RBP40.02■■■■■ 4
NDUFA11-203ENST00000591160 DCAF8L2P0C7V8 631 aa39.96■■■■□ 3.99
NDUFA11-203ENST00000591160 MYO15BQ96JP2 1530 aa39.9■■■■□ 3.98
NDUFA11-203ENST00000591160 DCAF1Q9Y4B6 1507 aa39.76■■■■□ 3.96
NDUFA11-203ENST00000591160 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.87
NDUFA11-203ENST00000591160 SCRIBQ14160 1630 aa38.94■■■■□ 3.82
NDUFA11-203ENST00000591160 BICRAQ9NZM4 1560 aa38.84■■■■□ 3.81
NDUFA11-203ENST00000591160 PABPN1Q86U42 306 aaKnown RBP eCLIP38.77■■■■□ 3.8
NDUFA11-203ENST00000591160 SHROOM4Q9ULL8 1493 aa38.57■■■■□ 3.76
NDUFA11-203ENST00000591160 DNAJC5BQ9UF47 199 aa37.89■■■■□ 3.66
NDUFA11-203ENST00000591160 EIF4G1Q04637 1599 aaKnown RBP37.85■■■■□ 3.65
NDUFA11-203ENST00000591160 CC2D2AQ9P2K1 1620 aa37.66■■■■□ 3.62
NDUFA11-203ENST00000591160 CECR2Q9BXF3 1484 aa37.36■■■■□ 3.57
NDUFA11-203ENST00000591160 SMARCA4P51532 1647 aa37.27■■■■□ 3.56
NDUFA11-203ENST00000591160 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
NDUFA11-203ENST00000591160 SMARCA2P51531 1590 aa37.02■■■■□ 3.52
NDUFA11-203ENST00000591160 ATAD2BQ9ULI0 1458 aa36.96■■■■□ 3.51
NDUFA11-203ENST00000591160 MROH2BQ7Z745 1585 aa36.95■■■■□ 3.51
NDUFA11-203ENST00000591160 NCAPD3P42695 1498 aa36.93■■■■□ 3.5
NDUFA11-203ENST00000591160 PEG3Q9GZU2 1588 aa36.9■■■■□ 3.5
NDUFA11-203ENST00000591160 HMGXB3Q12766 1538 aa36.85■■■■□ 3.49
NDUFA11-203ENST00000591160 BAZ1BQ9UIG0 1483 aaKnown RBP36.73■■■■□ 3.47
NDUFA11-203ENST00000591160 WIZO95785 1651 aa36.61■■■■□ 3.45
NDUFA11-203ENST00000591160 RSF1Q96T23 1441 aaPredicted RBP36.56■■■■□ 3.44
NDUFA11-203ENST00000591160 TOP2AP11388 1531 aaKnown RBP36.26■■■■□ 3.4
NDUFA11-203ENST00000591160 LAMC3Q9Y6N6 1575 aa36.03■■■■□ 3.36
NDUFA11-203ENST00000591160 NESP48681 1621 aa35.98■■■■□ 3.35
NDUFA11-203ENST00000591160 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
NDUFA11-203ENST00000591160 CADPSQ9ULU8 1353 aa35.85■■■■□ 3.33
NDUFA11-203ENST00000591160 CCDC88BA6NC98 1476 aa35.75■■■■□ 3.31
NDUFA11-203ENST00000591160 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
NDUFA11-203ENST00000591160 KIF21AQ7Z4S6 1674 aa35.69■■■■□ 3.3
NDUFA11-203ENST00000591160 CFTRP13569 1480 aa35.68■■■■□ 3.3
NDUFA11-203ENST00000591160 SUPT5HO00267 1087 aaKnown RBP35.67■■■■□ 3.3
NDUFA11-203ENST00000591160 PRDM2Q13029 1718 aa35.61■■■■□ 3.29
NDUFA11-203ENST00000591160 THOC2Q8NI27 1593 aaKnown RBP35.52■■■■□ 3.28
NDUFA11-203ENST00000591160 CUX2O14529 1486 aa35.48■■■■□ 3.27
NDUFA11-203ENST00000591160 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
NDUFA11-203ENST00000591160 CEP164Q9UPV0 1460 aa35.47■■■■□ 3.27
NDUFA11-203ENST00000591160 MRC2Q9UBG0 1479 aa35.38■■■■□ 3.25
NDUFA11-203ENST00000591160 WDR62O43379 1518 aa35.27■■■■□ 3.24
NDUFA11-203ENST00000591160 URB2Q14146 1524 aaKnown RBP35.1■■■■□ 3.21
NDUFA11-203ENST00000591160 ABCC8Q09428 1581 aa34.99■■■■□ 3.19
NDUFA11-203ENST00000591160 DNMBPQ6XZF7 1577 aa34.95■■■■□ 3.18
NDUFA11-203ENST00000591160 TOPBP1Q92547 1522 aa34.92■■■■□ 3.18
NDUFA11-203ENST00000591160 IFT140Q96RY7 1462 aa34.7■■■■□ 3.15
NDUFA11-203ENST00000591160 CUX1P39880 1505 aa34.69■■■■□ 3.14
NDUFA11-203ENST00000591160 POLA1P09884 1462 aaPredicted RBP34.63■■■■□ 3.13
NDUFA11-203ENST00000591160 FGD5Q6ZNL6 1462 aa34.57■■■■□ 3.12
NDUFA11-203ENST00000591160 TARBP1Q13395 1621 aaKnown RBP34.55■■■■□ 3.12
NDUFA11-203ENST00000591160 WRNQ14191 1432 aaPredicted RBP eCLIP34.52■■■■□ 3.12
NDUFA11-203ENST00000591160 BIVM-ERCC5R4GMW8 1640 aa34.5■■■■□ 3.11
NDUFA11-203ENST00000591160 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
NDUFA11-203ENST00000591160 SOGA1O94964 1423 aa34.46■■■■□ 3.11
NDUFA11-203ENST00000591160 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
NDUFA11-203ENST00000591160 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.1
NDUFA11-203ENST00000591160 SYNJ1O43426 1573 aa34.44■■■■□ 3.1
NDUFA11-203ENST00000591160 RAD54L2Q9Y4B4 1467 aa34.42■■■■□ 3.1
NDUFA11-203ENST00000591160 WDR97A6NE52 1622 aa34.39■■■■□ 3.1
NDUFA11-203ENST00000591160 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.08
NDUFA11-203ENST00000591160 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
NDUFA11-203ENST00000591160 TDRD9Q8NDG6 1382 aaKnown RBP34.22■■■■□ 3.07
NDUFA11-203ENST00000591160 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
NDUFA11-203ENST00000591160 DNAJC5Q9H3Z4 198 aa34.13■■■■□ 3.05
NDUFA11-203ENST00000591160 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
NDUFA11-203ENST00000591160 GAPVD1Q14C86 1478 aa34.1■■■■□ 3.05
NDUFA11-203ENST00000591160 GRIN2BQ13224 1484 aa34.09■■■■□ 3.05
NDUFA11-203ENST00000591160 SNAPC4Q5SXM2 1469 aa34.02■■■■□ 3.04
NDUFA11-203ENST00000591160 MAGI1Q96QZ7 1491 aaPredicted RBP34.02■■■■□ 3.04
NDUFA11-203ENST00000591160 CHD1O14646 1710 aa34.01■■■■□ 3.04
NDUFA11-203ENST00000591160 OSCARQ8IYS5 282 aa33.94■■■■□ 3.02
NDUFA11-203ENST00000591160 ERICH3Q5RHP9 1530 aa33.88■■■■□ 3.01
NDUFA11-203ENST00000591160 SYNJ2O15056 1496 aa33.87■■■■□ 3.01
NDUFA11-203ENST00000591160 FBLN2P98095 1184 aa33.85■■■■□ 3.01
NDUFA11-203ENST00000591160 ADAMTS12P58397 1594 aa33.81■■■■□ 3
NDUFA11-203ENST00000591160 KIF27Q86VH2 1401 aa33.8■■■■□ 3
NDUFA11-203ENST00000591160 CHMP7Q8WUX9 453 aaPredicted RBP33.79■■■■□ 3
NDUFA11-203ENST00000591160 TRIM41Q8WV44 630 aa33.73■■■□□ 2.99
NDUFA11-203ENST00000591160 FHAD1B1AJZ9 1412 aa33.71■■■□□ 2.99
NDUFA11-203ENST00000591160 CUL7Q14999 1698 aa33.65■■■□□ 2.98
NDUFA11-203ENST00000591160 GRIN2AQ12879 1464 aa33.65■■■□□ 2.98
NDUFA11-203ENST00000591160 CLASP1Q7Z460 1538 aa33.58■■■□□ 2.97
NDUFA11-203ENST00000591160 IGF1RP08069 1367 aa33.55■■■□□ 2.96
NDUFA11-203ENST00000591160 CEP170Q5SW79 1584 aa33.48■■■□□ 2.95
NDUFA11-203ENST00000591160 NUP160Q12769 1436 aa33.47■■■□□ 2.95
NDUFA11-203ENST00000591160 RIMBP3CA6NJZ7 1639 aa33.46■■■□□ 2.95
NDUFA11-203ENST00000591160 RIMBP3BA6NNM3 1639 aa33.46■■■□□ 2.95
NDUFA11-203ENST00000591160 RIMBP3Q9UFD9 1639 aa33.46■■■□□ 2.95
NDUFA11-203ENST00000591160 ARHGEF11O15085 1522 aa33.45■■■□□ 2.95
NDUFA11-203ENST00000591160 RUSC2Q8N2Y8 1516 aa33.42■■■□□ 2.94
NDUFA11-203ENST00000591160 CARMIL1Q5VZK9 1371 aa33.4■■■□□ 2.94
NDUFA11-203ENST00000591160 CHIC1Q5VXU3 224 aa33.33■■■□□ 2.93
NDUFA11-203ENST00000591160 SHROOM2Q13796 1616 aa33.28■■■□□ 2.92
NDUFA11-203ENST00000591160 RAPGEF2Q9Y4G8 1499 aa33.26■■■□□ 2.92
NDUFA11-203ENST00000591160 EEA1Q15075 1411 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms