RNA–Protein interactions for RNA: ENST00000523509.5

FAM49B-226, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-226ENST00000523509 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
FAM49B-226ENST00000523509 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
FAM49B-226ENST00000523509 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
FAM49B-226ENST00000523509 CCDC180Q9P1Z9 1646 aa13.29□□□□□ -0.28
FAM49B-226ENST00000523509 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
FAM49B-226ENST00000523509 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
FAM49B-226ENST00000523509 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.34
FAM49B-226ENST00000523509 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
FAM49B-226ENST00000523509 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
FAM49B-226ENST00000523509 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
FAM49B-226ENST00000523509 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
FAM49B-226ENST00000523509 MYO15BQ96JP2 1530 aa12.52□□□□□ -0.41
FAM49B-226ENST00000523509 SENP3Q9H4L4 574 aaPredicted RBP12.49□□□□□ -0.41
FAM49B-226ENST00000523509 ABCC9O60706 1549 aa12.43□□□□□ -0.42
FAM49B-226ENST00000523509 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
FAM49B-226ENST00000523509 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
FAM49B-226ENST00000523509 NACADO15069 1562 aa12.23□□□□□ -0.45
FAM49B-226ENST00000523509 HRCP23327 699 aa12.19□□□□□ -0.46
FAM49B-226ENST00000523509 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
FAM49B-226ENST00000523509 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
FAM49B-226ENST00000523509 LOC105371045A0A1W2PR82 267 aa12.08□□□□□ -0.48
FAM49B-226ENST00000523509 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
FAM49B-226ENST00000523509 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
FAM49B-226ENST00000523509 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
FAM49B-226ENST00000523509 WIZO95785 1651 aa11.97□□□□□ -0.49
FAM49B-226ENST00000523509 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.49
FAM49B-226ENST00000523509 TRIM26Q12899 539 aaPredicted RBP11.94□□□□□ -0.5
FAM49B-226ENST00000523509 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
FAM49B-226ENST00000523509 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
FAM49B-226ENST00000523509 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
FAM49B-226ENST00000523509 TOP2AP11388 1531 aaKnown RBP11.83□□□□□ -0.52
FAM49B-226ENST00000523509 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
FAM49B-226ENST00000523509 PPARGC1BQ86YN6 1023 aaKnown RBP11.81□□□□□ -0.52
FAM49B-226ENST00000523509 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
FAM49B-226ENST00000523509 FAM9AQ8IZU1 332 aaPredicted RBP11.74□□□□□ -0.53
FAM49B-226ENST00000523509 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
FAM49B-226ENST00000523509 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
FAM49B-226ENST00000523509 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
FAM49B-226ENST00000523509 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
FAM49B-226ENST00000523509 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
FAM49B-226ENST00000523509 FOXD1Q16676 465 aa11.65□□□□□ -0.55
FAM49B-226ENST00000523509 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
FAM49B-226ENST00000523509 EEA1Q15075 1411 aa11.6□□□□□ -0.55
FAM49B-226ENST00000523509 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
FAM49B-226ENST00000523509 SOGA1O94964 1423 aa11.55□□□□□ -0.56
FAM49B-226ENST00000523509 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
FAM49B-226ENST00000523509 CEP162Q5TB80 1403 aa11.52□□□□□ -0.57
FAM49B-226ENST00000523509 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
FAM49B-226ENST00000523509 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
FAM49B-226ENST00000523509 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
FAM49B-226ENST00000523509 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
FAM49B-226ENST00000523509 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
FAM49B-226ENST00000523509 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
FAM49B-226ENST00000523509 KIF21BO75037 1637 aa11.46□□□□□ -0.57
FAM49B-226ENST00000523509 BAZ1BQ9UIG0 1483 aaKnown RBP11.42□□□□□ -0.58
FAM49B-226ENST00000523509 CEP164Q9UPV0 1460 aa11.41□□□□□ -0.58
FAM49B-226ENST00000523509 ADRA2BP18089 450 aa11.39□□□□□ -0.59
FAM49B-226ENST00000523509 TOP2BQ02880 1626 aa11.37□□□□□ -0.59
FAM49B-226ENST00000523509 BIVM-ERCC5R4GMW8 1640 aa11.36□□□□□ -0.59
FAM49B-226ENST00000523509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
FAM49B-226ENST00000523509 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
FAM49B-226ENST00000523509 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
FAM49B-226ENST00000523509 HMGXB3Q12766 1538 aa11.33□□□□□ -0.6
FAM49B-226ENST00000523509 MSH5O43196 834 aa11.32□□□□□ -0.6
FAM49B-226ENST00000523509 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
FAM49B-226ENST00000523509 CLIP1P30622 1438 aa11.29□□□□□ -0.6
FAM49B-226ENST00000523509 VPS8Q8N3P4 1428 aa11.29□□□□□ -0.6
FAM49B-226ENST00000523509 RAPGEF2Q9Y4G8 1499 aa11.29□□□□□ -0.6
FAM49B-226ENST00000523509 ERICH3Q5RHP9 1530 aa11.28□□□□□ -0.6
FAM49B-226ENST00000523509 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
FAM49B-226ENST00000523509 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
FAM49B-226ENST00000523509 CUX1P39880 1505 aa11.21□□□□□ -0.61
FAM49B-226ENST00000523509 PRDM2Q13029 1718 aa11.21□□□□□ -0.62
FAM49B-226ENST00000523509 CFTRP13569 1480 aa11.21□□□□□ -0.62
FAM49B-226ENST00000523509 KCNA4P22459 653 aa11.2□□□□□ -0.62
FAM49B-226ENST00000523509 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
FAM49B-226ENST00000523509 TTBK1Q5TCY1 1321 aaPredicted RBP11.18□□□□□ -0.62
FAM49B-226ENST00000523509 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
FAM49B-226ENST00000523509 DIEXFQ68CQ4 756 aaKnown RBP11.16□□□□□ -0.62
FAM49B-226ENST00000523509 KIF27Q86VH2 1401 aa11.14□□□□□ -0.63
FAM49B-226ENST00000523509 ZNF316A6NFI3 1004 aaPredicted RBP11.12□□□□□ -0.63
FAM49B-226ENST00000523509 ACIN1Q9UKV3 1341 aaKnown RBP11.12□□□□□ -0.63
FAM49B-226ENST00000523509 APLP2Q06481 763 aa11.09□□□□□ -0.63
FAM49B-226ENST00000523509 CLSPNQ9HAW4 1339 aa11.08□□□□□ -0.64
FAM49B-226ENST00000523509 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
FAM49B-226ENST00000523509 HNRNPUL2Q1KMD3 747 aaKnown RBP11.07□□□□□ -0.64
FAM49B-226ENST00000523509 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
FAM49B-226ENST00000523509 CUX2O14529 1486 aa11.06□□□□□ -0.64
FAM49B-226ENST00000523509 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
FAM49B-226ENST00000523509 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
FAM49B-226ENST00000523509 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
FAM49B-226ENST00000523509 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
FAM49B-226ENST00000523509 CENPBP07199 599 aaPredicted RBP11.03□□□□□ -0.64
FAM49B-226ENST00000523509 IGF1RP08069 1367 aa11.01□□□□□ -0.65
FAM49B-226ENST00000523509 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
FAM49B-226ENST00000523509 KANK4Q5T7N3 995 aaPredicted RBP11.01□□□□□ -0.65
FAM49B-226ENST00000523509 FGD5Q6ZNL6 1462 aa10.98□□□□□ -0.65
FAM49B-226ENST00000523509 TIAM1Q13009 1591 aa10.97□□□□□ -0.65
FAM49B-226ENST00000523509 RANGAP1P46060 587 aaPredicted RBP10.97□□□□□ -0.65
FAM49B-226ENST00000523509 CCNB3Q8WWL7 1395 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms