RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702	AEBP2	Q6ZN18	517 aa	Predicted RBP	23.43	■■□□□ 1.34
FAM49B-222	ENST00000522702	CHIC1	Q5VXU3	224 aa		22.25	■■□□□ 1.15
FAM49B-222	ENST00000522702	SENP3	Q9H4L4	574 aa	Predicted RBP	20.09	■□□□□ 0.81
FAM49B-222	ENST00000522702	PHF23	Q9BUL5	403 aa	Predicted RBP	19.81	■□□□□ 0.76
FAM49B-222	ENST00000522702	FOXD1	Q16676	465 aa		18.69	■□□□□ 0.58
FAM49B-222	ENST00000522702	PLPPR3	Q6T4P5	718 aa		17.81	■□□□□ 0.44
FAM49B-222	ENST00000522702	MSH5	O43196	834 aa		17.56	■□□□□ 0.4
FAM49B-222	ENST00000522702	PIAS4	Q8N2W9	510 aa	Predicted RBP	17.48	■□□□□ 0.39
FAM49B-222	ENST00000522702	PPP6R1	Q9UPN7	881 aa		17.42	■□□□□ 0.38
FAM49B-222	ENST00000522702	ADRA2B	P18089	450 aa		17.39	■□□□□ 0.37
FAM49B-222	ENST00000522702	POTED	Q86YR6	584 aa		17.17	■□□□□ 0.34
FAM49B-222	ENST00000522702	SCAF1	Q9H7N4	1312 aa	Known RBP	16.01	■□□□□ 0.15
FAM49B-222	ENST00000522702	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.99	■□□□□ 0.15
FAM49B-222	ENST00000522702	DMRT2	Q9Y5R5	561 aa		15.89	■□□□□ 0.13
FAM49B-222	ENST00000522702	PPP4R3CP	Q6ZMV5	832 aa		15.59	■□□□□ 0.09
FAM49B-222	ENST00000522702	DCAF8L1	A6NGE4	600 aa		15.33	■□□□□ 0.04
FAM49B-222	ENST00000522702	CNKSR2	Q8WXI2	1034 aa		15.32	■□□□□ 0.04
FAM49B-222	ENST00000522702	HOXD11	P31277	338 aa	Predicted RBP	15.28	■□□□□ 0.04
FAM49B-222	ENST00000522702	RNF216	Q9NWF9	866 aa	Predicted RBP	15.18	■□□□□ 0.02
FAM49B-222	ENST00000522702	CACNB1	Q02641	598 aa	Predicted RBP	15.13	■□□□□ 0.01
FAM49B-222	ENST00000522702	NCBP3	Q53F19	620 aa	Known RBP	15.04	■□□□□ -0
FAM49B-222	ENST00000522702	RNF39	Q9H2S5	420 aa		14.93	□□□□□ -0.02
FAM49B-222	ENST00000522702	DNAJC5B	Q9UF47	199 aa		14.78	□□□□□ -0.04
FAM49B-222	ENST00000522702	C1QBP	Q07021	282 aa	Known RBP	14.76	□□□□□ -0.05
FAM49B-222	ENST00000522702	NPM3	O75607	178 aa	Known RBP	14.73	□□□□□ -0.05
FAM49B-222	ENST00000522702	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.64	□□□□□ -0.07
FAM49B-222	ENST00000522702	KCNA4	P22459	653 aa		14.39	□□□□□ -0.11
FAM49B-222	ENST00000522702		U3KPZ7	1027 aa	Predicted RBP	14.23	□□□□□ -0.13
FAM49B-222	ENST00000522702	CAPN15	O75808	1086 aa		14.11	□□□□□ -0.15
FAM49B-222	ENST00000522702	SLC4A2	P04920	1241 aa		14.05	□□□□□ -0.16
FAM49B-222	ENST00000522702	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.05	□□□□□ -0.16
FAM49B-222	ENST00000522702	DSG3	P32926	999 aa		13.98	□□□□□ -0.17
FAM49B-222	ENST00000522702	APLP2	Q06481	763 aa		13.96	□□□□□ -0.17
FAM49B-222	ENST00000522702	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.92	□□□□□ -0.18
FAM49B-222	ENST00000522702	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.92	□□□□□ -0.18
FAM49B-222	ENST00000522702	TRH	P20396	242 aa	Predicted RBP	13.86	□□□□□ -0.19
FAM49B-222	ENST00000522702	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.82	□□□□□ -0.2
FAM49B-222	ENST00000522702	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.82	□□□□□ -0.2
FAM49B-222	ENST00000522702	ABCB7	O75027	752 aa		13.73	□□□□□ -0.21
FAM49B-222	ENST00000522702	MYCN	P04198	464 aa	Predicted RBP	13.66	□□□□□ -0.22
FAM49B-222	ENST00000522702	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.63	□□□□□ -0.23
FAM49B-222	ENST00000522702	POLA2	Q14181	598 aa		13.47	□□□□□ -0.25
FAM49B-222	ENST00000522702	POTEH	Q6S545	545 aa		13.47	□□□□□ -0.25
FAM49B-222	ENST00000522702	FOXD4L1	Q9NU39	408 aa		13.47	□□□□□ -0.25
FAM49B-222	ENST00000522702	RBM42	Q9BTD8	480 aa	Known RBP	13.4	□□□□□ -0.26
FAM49B-222	ENST00000522702	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.29	□□□□□ -0.28
FAM49B-222	ENST00000522702	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.22	□□□□□ -0.29
FAM49B-222	ENST00000522702	ZBTB22	O15209	634 aa		13.18	□□□□□ -0.3
FAM49B-222	ENST00000522702	ATXN8OS	P0DMR3	200 aa		13.1	□□□□□ -0.31
FAM49B-222	ENST00000522702	CHRDL2	Q6WN34	429 aa		13.09	□□□□□ -0.31
FAM49B-222	ENST00000522702	AKT1S1	Q96B36	256 aa		13.06	□□□□□ -0.32
FAM49B-222	ENST00000522702	OSCAR	Q8IYS5	282 aa		12.99	□□□□□ -0.33
FAM49B-222	ENST00000522702	REM2	Q8IYK8	340 aa	Predicted RBP	12.93	□□□□□ -0.34
FAM49B-222	ENST00000522702	FBLN2	P98095	1184 aa		12.89	□□□□□ -0.35
FAM49B-222	ENST00000522702	SPDYE2B	A6NHP3	402 aa		12.78	□□□□□ -0.36
FAM49B-222	ENST00000522702	SPDYE6	P0CI01	402 aa		12.78	□□□□□ -0.36
FAM49B-222	ENST00000522702	SPDYE2	Q495Y8	402 aa		12.78	□□□□□ -0.36
FAM49B-222	ENST00000522702	PITPNM1	O00562	1244 aa		12.76	□□□□□ -0.37
FAM49B-222	ENST00000522702	PIP4P2	Q8N4L2	257 aa		12.75	□□□□□ -0.37
FAM49B-222	ENST00000522702	FXR2	P51116	673 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
FAM49B-222	ENST00000522702	MKRN4P	Q13434	485 aa	Predicted RBP	12.67	□□□□□ -0.38
FAM49B-222	ENST00000522702	ZNF692	Q9BU19	519 aa	Predicted RBP	12.65	□□□□□ -0.38
FAM49B-222	ENST00000522702	HAX1	O00165	279 aa		12.61	□□□□□ -0.39
FAM49B-222	ENST00000522702	SP7	Q8TDD2	431 aa	Predicted RBP	12.61	□□□□□ -0.39
FAM49B-222	ENST00000522702	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.59	□□□□□ -0.39
FAM49B-222	ENST00000522702	CLEC11A	Q9Y240	323 aa		12.59	□□□□□ -0.39
FAM49B-222	ENST00000522702	CSRNP3	Q8WYN3	585 aa		12.58	□□□□□ -0.4
FAM49B-222	ENST00000522702	SSUH2	Q9Y2M2	353 aa		12.54	□□□□□ -0.4
FAM49B-222	ENST00000522702	PRKAR2A	P13861	404 aa	Known RBP	12.47	□□□□□ -0.41
FAM49B-222	ENST00000522702	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
FAM49B-222	ENST00000522702	EHMT2	Q96KQ7	1210 aa		12.43	□□□□□ -0.42
FAM49B-222	ENST00000522702	PRR29	P0C7W0	189 aa		12.38	□□□□□ -0.43
FAM49B-222	ENST00000522702	EVX2	Q03828	476 aa		12.34	□□□□□ -0.43
FAM49B-222	ENST00000522702	CHADL	Q6NUI6	762 aa		12.29	□□□□□ -0.44
FAM49B-222	ENST00000522702	C19orf67	A6NJJ6	358 aa		12.26	□□□□□ -0.45
FAM49B-222	ENST00000522702	STAG3	Q9UJ98	1225 aa		12.13	□□□□□ -0.47
FAM49B-222	ENST00000522702	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.13	□□□□□ -0.47
FAM49B-222	ENST00000522702	SPDYE4	A6NLX3	237 aa		12.12	□□□□□ -0.47
FAM49B-222	ENST00000522702	GABBR2	O75899	941 aa		12.11	□□□□□ -0.47
FAM49B-222	ENST00000522702	CD44	P16070	742 aa	Known RBP	12.06	□□□□□ -0.48
FAM49B-222	ENST00000522702	CLCN6	P51797	869 aa		11.98	□□□□□ -0.49
FAM49B-222	ENST00000522702	CREBZF	Q9NS37	354 aa		11.98	□□□□□ -0.49
FAM49B-222	ENST00000522702	ZRANB1	Q9UGI0	708 aa		11.91	□□□□□ -0.5
FAM49B-222	ENST00000522702	NPM1	P06748	294 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
FAM49B-222	ENST00000522702	LHX8	Q68G74	356 aa		11.86	□□□□□ -0.51
FAM49B-222	ENST00000522702	PAK3	O75914	559 aa	Predicted RBP	11.85	□□□□□ -0.51
FAM49B-222	ENST00000522702	ZNF579	Q8NAF0	562 aa	Known RBP	11.85	□□□□□ -0.51
FAM49B-222	ENST00000522702	DCBLD2	Q96PD2	775 aa		11.84	□□□□□ -0.51
FAM49B-222	ENST00000522702	POTEI	P0CG38	1075 aa		11.79	□□□□□ -0.52
FAM49B-222	ENST00000522702	PROM2	Q8N271	834 aa		11.74	□□□□□ -0.53
FAM49B-222	ENST00000522702	MNX1	P50219	401 aa	Predicted RBP	11.73	□□□□□ -0.53
FAM49B-222	ENST00000522702	GALR2	O43603	387 aa	Predicted RBP	11.7	□□□□□ -0.54
FAM49B-222	ENST00000522702	PHF12	Q96QT6	1004 aa		11.69	□□□□□ -0.54
FAM49B-222	ENST00000522702	PLEKHG5	O94827	1062 aa		11.67	□□□□□ -0.54
FAM49B-222	ENST00000522702	MIER1	Q8N108	512 aa		11.63	□□□□□ -0.55
FAM49B-222	ENST00000522702	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.6	□□□□□ -0.55
FAM49B-222	ENST00000522702	PLCD3	Q8N3E9	789 aa		11.52	□□□□□ -0.57
FAM49B-222	ENST00000522702	MS4A3	Q96HJ5	214 aa		11.52	□□□□□ -0.57
FAM49B-222	ENST00000522702	CCDC61	Q9Y6R9	512 aa		11.49	□□□□□ -0.57
FAM49B-222	ENST00000522702	PELP1	Q8IZL8	1130 aa	Known RBP	11.47	□□□□□ -0.57

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