RNA–Protein interactions for RNA: ENST00000525634.5

RPS13-202, Transcript of ribosomal protein S13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS13, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-202ENST00000525634 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
RPS13-202ENST00000525634 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
RPS13-202ENST00000525634 NISCHQ9Y2I1 1504 aa23.52■■□□□ 1.36
RPS13-202ENST00000525634 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
RPS13-202ENST00000525634 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
RPS13-202ENST00000525634 ABCC9O60706 1549 aa21.12■□□□□ 0.97
RPS13-202ENST00000525634 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
RPS13-202ENST00000525634 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
RPS13-202ENST00000525634 NACADO15069 1562 aa20.01■□□□□ 0.79
RPS13-202ENST00000525634 PLPPR3Q6T4P5 718 aa20.01■□□□□ 0.79
RPS13-202ENST00000525634 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
RPS13-202ENST00000525634 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
RPS13-202ENST00000525634 MYO15BQ96JP2 1530 aa19.76■□□□□ 0.75
RPS13-202ENST00000525634 DCAF8L2P0C7V8 631 aa19.71■□□□□ 0.75
RPS13-202ENST00000525634 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
RPS13-202ENST00000525634 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
RPS13-202ENST00000525634 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
RPS13-202ENST00000525634 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
RPS13-202ENST00000525634 FOXD1Q16676 465 aa19.46■□□□□ 0.71
RPS13-202ENST00000525634 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
RPS13-202ENST00000525634 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
RPS13-202ENST00000525634 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.65
RPS13-202ENST00000525634 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
RPS13-202ENST00000525634 CECR2Q9BXF3 1484 aa19.05■□□□□ 0.64
RPS13-202ENST00000525634 ADRA2BP18089 450 aa18.87■□□□□ 0.61
RPS13-202ENST00000525634 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
RPS13-202ENST00000525634 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
RPS13-202ENST00000525634 NCAPD3P42695 1498 aa18.46■□□□□ 0.54
RPS13-202ENST00000525634 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
RPS13-202ENST00000525634 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
RPS13-202ENST00000525634 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
RPS13-202ENST00000525634 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
RPS13-202ENST00000525634 CUX2O14529 1486 aa18.28■□□□□ 0.52
RPS13-202ENST00000525634 DNAJC5Q9H3Z4 198 aa18.27■□□□□ 0.52
RPS13-202ENST00000525634 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
RPS13-202ENST00000525634 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
RPS13-202ENST00000525634 PEG3Q9GZU2 1588 aa18.23■□□□□ 0.51
RPS13-202ENST00000525634 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
RPS13-202ENST00000525634 NESP48681 1621 aa18.15■□□□□ 0.5
RPS13-202ENST00000525634 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
RPS13-202ENST00000525634 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
RPS13-202ENST00000525634 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
RPS13-202ENST00000525634 MSH5O43196 834 aa18■□□□□ 0.47
RPS13-202ENST00000525634 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
RPS13-202ENST00000525634 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
RPS13-202ENST00000525634 WIZO95785 1651 aa17.9■□□□□ 0.46
RPS13-202ENST00000525634 CADPSQ9ULU8 1353 aa17.86■□□□□ 0.45
RPS13-202ENST00000525634 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
RPS13-202ENST00000525634 WDR62O43379 1518 aa17.77■□□□□ 0.44
RPS13-202ENST00000525634 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
RPS13-202ENST00000525634 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
RPS13-202ENST00000525634 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
RPS13-202ENST00000525634 CFTRP13569 1480 aa17.68■□□□□ 0.42
RPS13-202ENST00000525634 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
RPS13-202ENST00000525634 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
RPS13-202ENST00000525634 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
RPS13-202ENST00000525634 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
RPS13-202ENST00000525634 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
RPS13-202ENST00000525634 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
RPS13-202ENST00000525634 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
RPS13-202ENST00000525634 KCNA4P22459 653 aa17.36■□□□□ 0.37
RPS13-202ENST00000525634 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
RPS13-202ENST00000525634 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
RPS13-202ENST00000525634 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
RPS13-202ENST00000525634 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
RPS13-202ENST00000525634 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
RPS13-202ENST00000525634 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
RPS13-202ENST00000525634 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
RPS13-202ENST00000525634 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
RPS13-202ENST00000525634 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
RPS13-202ENST00000525634 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
RPS13-202ENST00000525634 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
RPS13-202ENST00000525634 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
RPS13-202ENST00000525634 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
RPS13-202ENST00000525634 CHD1O14646 1710 aa17.15■□□□□ 0.34
RPS13-202ENST00000525634 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
RPS13-202ENST00000525634 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.332e-8■■■■■ 39.2
RPS13-202ENST00000525634 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
RPS13-202ENST00000525634 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
RPS13-202ENST00000525634 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
RPS13-202ENST00000525634 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
RPS13-202ENST00000525634 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
RPS13-202ENST00000525634 SOGA1O94964 1423 aa17.04■□□□□ 0.32
RPS13-202ENST00000525634 CUX1P39880 1505 aa17.03■□□□□ 0.32
RPS13-202ENST00000525634 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
RPS13-202ENST00000525634 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
RPS13-202ENST00000525634 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
RPS13-202ENST00000525634 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.3
RPS13-202ENST00000525634 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
RPS13-202ENST00000525634 FBLN2P98095 1184 aa16.95■□□□□ 0.3
RPS13-202ENST00000525634 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
RPS13-202ENST00000525634 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
RPS13-202ENST00000525634 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
RPS13-202ENST00000525634 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
RPS13-202ENST00000525634 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
RPS13-202ENST00000525634 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
RPS13-202ENST00000525634 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
RPS13-202ENST00000525634 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
RPS13-202ENST00000525634 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
RPS13-202ENST00000525634 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms