RNA–Protein interactions for RNA: ENST00000526895.5

RPS13-204, Transcript of ribosomal protein S13, humanhuman

TSL 3

Gene RPS13, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-204ENST00000526895 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
RPS13-204ENST00000526895 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
RPS13-204ENST00000526895 ABCC9O60706 1549 aa31.65■■■□□ 2.66
RPS13-204ENST00000526895 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
RPS13-204ENST00000526895 NACADO15069 1562 aa30.2■■■□□ 2.43
RPS13-204ENST00000526895 DCAF8L2P0C7V8 631 aa30.01■■■□□ 2.39
RPS13-204ENST00000526895 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
RPS13-204ENST00000526895 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
RPS13-204ENST00000526895 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.34
RPS13-204ENST00000526895 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
RPS13-204ENST00000526895 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
RPS13-204ENST00000526895 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
RPS13-204ENST00000526895 BICRAQ9NZM4 1560 aa29.42■■■□□ 2.3
RPS13-204ENST00000526895 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
RPS13-204ENST00000526895 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
RPS13-204ENST00000526895 EIF4G1Q04637 1599 aaKnown RBP28.66■■■□□ 2.18
RPS13-204ENST00000526895 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
RPS13-204ENST00000526895 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
RPS13-204ENST00000526895 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
RPS13-204ENST00000526895 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
RPS13-204ENST00000526895 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
RPS13-204ENST00000526895 SMARCA2P51531 1590 aa27.76■■■□□ 2.03
RPS13-204ENST00000526895 BAZ1AQ9NRL2 1556 aaPredicted RBP27.75■■■□□ 2.03
RPS13-204ENST00000526895 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
RPS13-204ENST00000526895 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
RPS13-204ENST00000526895 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
RPS13-204ENST00000526895 BAZ1BQ9UIG0 1483 aaKnown RBP27.53■■■□□ 2
RPS13-204ENST00000526895 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
RPS13-204ENST00000526895 NESP48681 1621 aa27.27■■□□□ 1.96
RPS13-204ENST00000526895 CUX2O14529 1486 aa27.25■■□□□ 1.95
RPS13-204ENST00000526895 LAMC3Q9Y6N6 1575 aa27.19■■□□□ 1.94
RPS13-204ENST00000526895 WIZO95785 1651 aa27.18■■□□□ 1.94
RPS13-204ENST00000526895 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
RPS13-204ENST00000526895 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
RPS13-204ENST00000526895 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
RPS13-204ENST00000526895 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
RPS13-204ENST00000526895 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.9
RPS13-204ENST00000526895 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
RPS13-204ENST00000526895 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
RPS13-204ENST00000526895 CFTRP13569 1480 aa26.81■■□□□ 1.88
RPS13-204ENST00000526895 MRC2Q9UBG0 1479 aa26.76■■□□□ 1.87
RPS13-204ENST00000526895 FANCD2Q9BXW9 1451 aa26.7■■□□□ 1.87
RPS13-204ENST00000526895 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
RPS13-204ENST00000526895 WDR62O43379 1518 aa26.69■■□□□ 1.86
RPS13-204ENST00000526895 CCDC88BA6NC98 1476 aa26.61■■□□□ 1.85
RPS13-204ENST00000526895 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
RPS13-204ENST00000526895 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
RPS13-204ENST00000526895 ABCC8Q09428 1581 aa26.26■■□□□ 1.79
RPS13-204ENST00000526895 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
RPS13-204ENST00000526895 IFT140Q96RY7 1462 aa26.18■■□□□ 1.78
RPS13-204ENST00000526895 DNMBPQ6XZF7 1577 aa26.15■■□□□ 1.78
RPS13-204ENST00000526895 OSCARQ8IYS5 282 aa26.09■■□□□ 1.77
RPS13-204ENST00000526895 ZNF608Q9ULD9 1512 aaPredicted RBP26.07■■□□□ 1.76
RPS13-204ENST00000526895 SUPT5HO00267 1087 aaKnown RBP26.03■■□□□ 1.76
RPS13-204ENST00000526895 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
RPS13-204ENST00000526895 TARBP1Q13395 1621 aaKnown RBP25.97■■□□□ 1.75
RPS13-204ENST00000526895 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
RPS13-204ENST00000526895 SOGA1O94964 1423 aa25.88■■□□□ 1.73
RPS13-204ENST00000526895 AQRO60306 1485 aaKnown RBP eCLIP25.88■■□□□ 1.732e-8■■■■■ 39.2
RPS13-204ENST00000526895 CUX1P39880 1505 aa25.86■■□□□ 1.73
RPS13-204ENST00000526895 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
RPS13-204ENST00000526895 FGD5Q6ZNL6 1462 aa25.83■■□□□ 1.73
RPS13-204ENST00000526895 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
RPS13-204ENST00000526895 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
RPS13-204ENST00000526895 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
RPS13-204ENST00000526895 CHD1O14646 1710 aa25.65■■□□□ 1.7
RPS13-204ENST00000526895 FBLN2P98095 1184 aa25.63■■□□□ 1.69
RPS13-204ENST00000526895 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
RPS13-204ENST00000526895 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
RPS13-204ENST00000526895 RIMBP3CA6NJZ7 1639 aa25.61■■□□□ 1.69
RPS13-204ENST00000526895 RIMBP3BA6NNM3 1639 aa25.61■■□□□ 1.69
RPS13-204ENST00000526895 RIMBP3Q9UFD9 1639 aa25.61■■□□□ 1.69
RPS13-204ENST00000526895 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
RPS13-204ENST00000526895 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
RPS13-204ENST00000526895 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
RPS13-204ENST00000526895 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.682e-9■□□□□ 10.3
RPS13-204ENST00000526895 GAPVD1Q14C86 1478 aa25.56■■□□□ 1.68
RPS13-204ENST00000526895 CHMP7Q8WUX9 453 aaPredicted RBP25.55■■□□□ 1.68
RPS13-204ENST00000526895 TOP2BQ02880 1626 aa25.53■■□□□ 1.68
RPS13-204ENST00000526895 SYNJ2O15056 1496 aa25.52■■□□□ 1.68
RPS13-204ENST00000526895 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
RPS13-204ENST00000526895 ABCA5Q8WWZ7 1642 aa25.49■■□□□ 1.67
RPS13-204ENST00000526895 SYNJ1O43426 1573 aa25.46■■□□□ 1.67
RPS13-204ENST00000526895 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
RPS13-204ENST00000526895 CLASP1Q7Z460 1538 aa25.43■■□□□ 1.66
RPS13-204ENST00000526895 CYB5RLQ6IPT4 315 aa25.4■■□□□ 1.66
RPS13-204ENST00000526895 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
RPS13-204ENST00000526895 ERICH3Q5RHP9 1530 aa25.29■■□□□ 1.64
RPS13-204ENST00000526895 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
RPS13-204ENST00000526895 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
RPS13-204ENST00000526895 ADAMTS12P58397 1594 aa25.26■■□□□ 1.63
RPS13-204ENST00000526895 NUP160Q12769 1436 aa25.21■■□□□ 1.63
RPS13-204ENST00000526895 CEP170Q5SW79 1584 aa25.14■■□□□ 1.62
RPS13-204ENST00000526895 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
RPS13-204ENST00000526895 IGF1RP08069 1367 aa25.05■■□□□ 1.6
RPS13-204ENST00000526895 SHROOM2Q13796 1616 aa25.05■■□□□ 1.6
RPS13-204ENST00000526895 TRHP20396 242 aaPredicted RBP25■■□□□ 1.59
RPS13-204ENST00000526895 ERCC6L2Q5T890 1561 aa25■■□□□ 1.59
RPS13-204ENST00000526895 JPH4Q96JJ6 628 aa24.98■■□□□ 1.59
RPS13-204ENST00000526895 CUL7Q14999 1698 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms