RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
PTPRK-209ENST00000415046 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
PTPRK-209ENST00000415046 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
PTPRK-209ENST00000415046 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
PTPRK-209ENST00000415046 FOXD1Q16676 465 aa21.42■■□□□ 1.02
PTPRK-209ENST00000415046 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
PTPRK-209ENST00000415046 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
PTPRK-209ENST00000415046 ADRA2BP18089 450 aa20.19■□□□□ 0.82
PTPRK-209ENST00000415046 PIAS4Q8N2W9 510 aaPredicted RBP20.09■□□□□ 0.81
PTPRK-209ENST00000415046 MSH5O43196 834 aa19.96■□□□□ 0.79
PTPRK-209ENST00000415046 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
PTPRK-209ENST00000415046 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
PTPRK-209ENST00000415046 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
PTPRK-209ENST00000415046 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.52
PTPRK-209ENST00000415046 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
PTPRK-209ENST00000415046 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
PTPRK-209ENST00000415046 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
PTPRK-209ENST00000415046 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
PTPRK-209ENST00000415046 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
PTPRK-209ENST00000415046 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
PTPRK-209ENST00000415046 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
PTPRK-209ENST00000415046 KCNA4P22459 653 aa17.39■□□□□ 0.37
PTPRK-209ENST00000415046 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
PTPRK-209ENST00000415046 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
PTPRK-209ENST00000415046 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
PTPRK-209ENST00000415046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTPRK-209ENST00000415046 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
PTPRK-209ENST00000415046 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
PTPRK-209ENST00000415046 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
PTPRK-209ENST00000415046 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
PTPRK-209ENST00000415046 SPINK5Q9NQ38 1064 aaPredicted RBP16.25■□□□□ 0.19
PTPRK-209ENST00000415046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
PTPRK-209ENST00000415046 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
PTPRK-209ENST00000415046 CAPN15O75808 1086 aa16.19■□□□□ 0.18
PTPRK-209ENST00000415046 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
PTPRK-209ENST00000415046 APLP2Q06481 763 aa16.17■□□□□ 0.18
PTPRK-209ENST00000415046 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
PTPRK-209ENST00000415046 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
PTPRK-209ENST00000415046 DSG3P32926 999 aa16.06■□□□□ 0.16
PTPRK-209ENST00000415046 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
PTPRK-209ENST00000415046 ZBTB22O15209 634 aa16.01■□□□□ 0.15
PTPRK-209ENST00000415046 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
PTPRK-209ENST00000415046 ABCB7O75027 752 aa15.85■□□□□ 0.13
PTPRK-209ENST00000415046 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
PTPRK-209ENST00000415046 ATXN8OSP0DMR3 200 aa15.65■□□□□ 0.1
PTPRK-209ENST00000415046 POLA2Q14181 598 aa15.64■□□□□ 0.09
PTPRK-209ENST00000415046 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
PTPRK-209ENST00000415046 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
PTPRK-209ENST00000415046 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
PTPRK-209ENST00000415046 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
PTPRK-209ENST00000415046 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
PTPRK-209ENST00000415046 POTEHQ6S545 545 aa15.14■□□□□ 0.01
PTPRK-209ENST00000415046 FBLN2P98095 1184 aa15.12■□□□□ 0.01
PTPRK-209ENST00000415046 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
PTPRK-209ENST00000415046 AKT1S1Q96B36 256 aa15.04■□□□□ -0
PTPRK-209ENST00000415046 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
PTPRK-209ENST00000415046 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
PTPRK-209ENST00000415046 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
PTPRK-209ENST00000415046 REM2Q8IYK8 340 aaPredicted RBP14.88□□□□□ -0.03
PTPRK-209ENST00000415046 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
PTPRK-209ENST00000415046 SSUH2Q9Y2M2 353 aa14.79□□□□□ -0.04
PTPRK-209ENST00000415046 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
PTPRK-209ENST00000415046 PITPNM1O00562 1244 aa14.73□□□□□ -0.05
PTPRK-209ENST00000415046 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
PTPRK-209ENST00000415046 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
PTPRK-209ENST00000415046 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPRK-209ENST00000415046 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.085e-7■■□□□ 11.6
PTPRK-209ENST00000415046 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
PTPRK-209ENST00000415046 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
PTPRK-209ENST00000415046 PRR29P0C7W0 189 aa14.33□□□□□ -0.12
PTPRK-209ENST00000415046 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
PTPRK-209ENST00000415046 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
PTPRK-209ENST00000415046 PROM2Q8N271 834 aa14.23□□□□□ -0.13
PTPRK-209ENST00000415046 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
PTPRK-209ENST00000415046 HAX1O00165 279 aa14.2□□□□□ -0.14
PTPRK-209ENST00000415046 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-209ENST00000415046 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
PTPRK-209ENST00000415046 CREBZFQ9NS37 354 aa14.07□□□□□ -0.16
PTPRK-209ENST00000415046 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-209ENST00000415046 EVX2Q03828 476 aa14.05□□□□□ -0.16
PTPRK-209ENST00000415046 FKBP8Q14318 412 aa14.04□□□□□ -0.16
PTPRK-209ENST00000415046 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
PTPRK-209ENST00000415046 MNX1P50219 401 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-209ENST00000415046 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPRK-209ENST00000415046 GABBR2O75899 941 aa13.77□□□□□ -0.21
PTPRK-209ENST00000415046 MIER1Q8N108 512 aa13.75□□□□□ -0.21
PTPRK-209ENST00000415046 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
PTPRK-209ENST00000415046 ZNF579Q8NAF0 562 aaKnown RBP13.73□□□□□ -0.21
PTPRK-209ENST00000415046 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
PTPRK-209ENST00000415046 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-209ENST00000415046 CLCN6P51797 869 aa13.69□□□□□ -0.22
PTPRK-209ENST00000415046 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
PTPRK-209ENST00000415046 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
PTPRK-209ENST00000415046 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-209ENST00000415046 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
PTPRK-209ENST00000415046 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
PTPRK-209ENST00000415046 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-209ENST00000415046 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-209ENST00000415046 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
PTPRK-209ENST00000415046 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms