RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 NISCHQ9Y2I1 1504 aa36.32■■■■□ 3.4
ATP6V1F-201ENST00000249289 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
ATP6V1F-201ENST00000249289 ABCC9O60706 1549 aa31.09■■■□□ 2.57
ATP6V1F-201ENST00000249289 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
ATP6V1F-201ENST00000249289 NACADO15069 1562 aa30.17■■■□□ 2.42
ATP6V1F-201ENST00000249289 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
ATP6V1F-201ENST00000249289 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
ATP6V1F-201ENST00000249289 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
ATP6V1F-201ENST00000249289 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
ATP6V1F-201ENST00000249289 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
ATP6V1F-201ENST00000249289 SCRIBQ14160 1630 aa29.36■■■□□ 2.29
ATP6V1F-201ENST00000249289 BICRAQ9NZM4 1560 aa29.17■■■□□ 2.26
ATP6V1F-201ENST00000249289 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.24
ATP6V1F-201ENST00000249289 SHROOM4Q9ULL8 1493 aa28.98■■■□□ 2.23
ATP6V1F-201ENST00000249289 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
ATP6V1F-201ENST00000249289 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
ATP6V1F-201ENST00000249289 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
ATP6V1F-201ENST00000249289 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
ATP6V1F-201ENST00000249289 SMARCA4P51532 1647 aa28.14■■■□□ 2.09
ATP6V1F-201ENST00000249289 DNAJC5BQ9UF47 199 aa28.13■■■□□ 2.09
ATP6V1F-201ENST00000249289 MROH2BQ7Z745 1585 aa27.98■■■□□ 2.07
ATP6V1F-201ENST00000249289 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
ATP6V1F-201ENST00000249289 PEG3Q9GZU2 1588 aa27.87■■■□□ 2.05
ATP6V1F-201ENST00000249289 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
ATP6V1F-201ENST00000249289 NCAPD3P42695 1498 aa27.81■■■□□ 2.04
ATP6V1F-201ENST00000249289 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
ATP6V1F-201ENST00000249289 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
ATP6V1F-201ENST00000249289 WIZO95785 1651 aa27.69■■■□□ 2.02
ATP6V1F-201ENST00000249289 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
ATP6V1F-201ENST00000249289 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
ATP6V1F-201ENST00000249289 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
ATP6V1F-201ENST00000249289 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
ATP6V1F-201ENST00000249289 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
ATP6V1F-201ENST00000249289 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
ATP6V1F-201ENST00000249289 NESP48681 1621 aa26.99■■□□□ 1.91
ATP6V1F-201ENST00000249289 CFTRP13569 1480 aa26.93■■□□□ 1.9
ATP6V1F-201ENST00000249289 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
ATP6V1F-201ENST00000249289 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
ATP6V1F-201ENST00000249289 ERCC6Q03468 1493 aa26.8■■□□□ 1.88
ATP6V1F-201ENST00000249289 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
ATP6V1F-201ENST00000249289 FANCD2Q9BXW9 1451 aa26.7■■□□□ 1.87
ATP6V1F-201ENST00000249289 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
ATP6V1F-201ENST00000249289 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
ATP6V1F-201ENST00000249289 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
ATP6V1F-201ENST00000249289 WDR62O43379 1518 aa26.47■■□□□ 1.83
ATP6V1F-201ENST00000249289 CUX2O14529 1486 aa26.42■■□□□ 1.82
ATP6V1F-201ENST00000249289 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
ATP6V1F-201ENST00000249289 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
ATP6V1F-201ENST00000249289 DNMBPQ6XZF7 1577 aa26.34■■□□□ 1.81
ATP6V1F-201ENST00000249289 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
ATP6V1F-201ENST00000249289 CUX1P39880 1505 aa26.24■■□□□ 1.79
ATP6V1F-201ENST00000249289 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
ATP6V1F-201ENST00000249289 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.78
ATP6V1F-201ENST00000249289 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
ATP6V1F-201ENST00000249289 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
ATP6V1F-201ENST00000249289 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
ATP6V1F-201ENST00000249289 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
ATP6V1F-201ENST00000249289 IFT140Q96RY7 1462 aa26.08■■□□□ 1.77
ATP6V1F-201ENST00000249289 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.75
ATP6V1F-201ENST00000249289 SOGA1O94964 1423 aa25.98■■□□□ 1.75
ATP6V1F-201ENST00000249289 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
ATP6V1F-201ENST00000249289 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
ATP6V1F-201ENST00000249289 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
ATP6V1F-201ENST00000249289 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
ATP6V1F-201ENST00000249289 EIF4G3O43432 1585 aaKnown RBP25.86■■□□□ 1.73
ATP6V1F-201ENST00000249289 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
ATP6V1F-201ENST00000249289 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.72
ATP6V1F-201ENST00000249289 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
ATP6V1F-201ENST00000249289 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
ATP6V1F-201ENST00000249289 GAPVD1Q14C86 1478 aa25.72■■□□□ 1.71
ATP6V1F-201ENST00000249289 PBRM1Q86U86 1689 aa25.68■■□□□ 1.7
ATP6V1F-201ENST00000249289 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
ATP6V1F-201ENST00000249289 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
ATP6V1F-201ENST00000249289 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
ATP6V1F-201ENST00000249289 MAGI1Q96QZ7 1491 aaPredicted RBP25.6■■□□□ 1.69
ATP6V1F-201ENST00000249289 ERICH3Q5RHP9 1530 aa25.59■■□□□ 1.69
ATP6V1F-201ENST00000249289 SNAPC4Q5SXM2 1469 aa25.59■■□□□ 1.69
ATP6V1F-201ENST00000249289 ADAMTS12P58397 1594 aa25.5■■□□□ 1.67
ATP6V1F-201ENST00000249289 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
ATP6V1F-201ENST00000249289 CHD1O14646 1710 aa25.46■■□□□ 1.67
ATP6V1F-201ENST00000249289 CUL7Q14999 1698 aa25.45■■□□□ 1.66
ATP6V1F-201ENST00000249289 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
ATP6V1F-201ENST00000249289 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
ATP6V1F-201ENST00000249289 IGF1RP08069 1367 aa25.43■■□□□ 1.66
ATP6V1F-201ENST00000249289 EEA1Q15075 1411 aa25.4■■□□□ 1.66
ATP6V1F-201ENST00000249289 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
ATP6V1F-201ENST00000249289 FBLN2P98095 1184 aa25.36■■□□□ 1.65
ATP6V1F-201ENST00000249289 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
ATP6V1F-201ENST00000249289 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
ATP6V1F-201ENST00000249289 CARMIL1Q5VZK9 1371 aa25.31■■□□□ 1.64
ATP6V1F-201ENST00000249289 NUP160Q12769 1436 aa25.23■■□□□ 1.63
ATP6V1F-201ENST00000249289 PRXQ9BXM0 1461 aa25.22■■□□□ 1.63
ATP6V1F-201ENST00000249289 RAPGEF2Q9Y4G8 1499 aa25.22■■□□□ 1.63
ATP6V1F-201ENST00000249289 CSRNP3Q8WYN3 585 aa25.22■■□□□ 1.63
ATP6V1F-201ENST00000249289 CEP170Q5SW79 1584 aa25.21■■□□□ 1.63
ATP6V1F-201ENST00000249289 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
ATP6V1F-201ENST00000249289 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
ATP6V1F-201ENST00000249289 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
ATP6V1F-201ENST00000249289 KIF21BO75037 1637 aa25.12■■□□□ 1.61
ATP6V1F-201ENST00000249289 KIAA0586Q9BVV6 1533 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms