RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
RPS13-201ENST00000228140 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
RPS13-201ENST00000228140 ABCC9O60706 1549 aa23.02■■□□□ 1.28
RPS13-201ENST00000228140 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
RPS13-201ENST00000228140 NACADO15069 1562 aa21.99■■□□□ 1.11
RPS13-201ENST00000228140 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
RPS13-201ENST00000228140 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
RPS13-201ENST00000228140 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.06
RPS13-201ENST00000228140 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
RPS13-201ENST00000228140 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
RPS13-201ENST00000228140 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
RPS13-201ENST00000228140 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
RPS13-201ENST00000228140 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
RPS13-201ENST00000228140 SHROOM4Q9ULL8 1493 aa21.25■□□□□ 0.99
RPS13-201ENST00000228140 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
RPS13-201ENST00000228140 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
RPS13-201ENST00000228140 CC2D2AQ9P2K1 1620 aa20.87■□□□□ 0.93
RPS13-201ENST00000228140 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
RPS13-201ENST00000228140 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
RPS13-201ENST00000228140 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
RPS13-201ENST00000228140 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
RPS13-201ENST00000228140 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
RPS13-201ENST00000228140 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
RPS13-201ENST00000228140 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
RPS13-201ENST00000228140 PEG3Q9GZU2 1588 aa20.1■□□□□ 0.81
RPS13-201ENST00000228140 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
RPS13-201ENST00000228140 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
RPS13-201ENST00000228140 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
RPS13-201ENST00000228140 CUX2O14529 1486 aa19.85■□□□□ 0.77
RPS13-201ENST00000228140 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
RPS13-201ENST00000228140 WIZO95785 1651 aa19.81■□□□□ 0.76
RPS13-201ENST00000228140 NESP48681 1621 aa19.8■□□□□ 0.76
RPS13-201ENST00000228140 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
RPS13-201ENST00000228140 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
RPS13-201ENST00000228140 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
RPS13-201ENST00000228140 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
RPS13-201ENST00000228140 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
RPS13-201ENST00000228140 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
RPS13-201ENST00000228140 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
RPS13-201ENST00000228140 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
RPS13-201ENST00000228140 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
RPS13-201ENST00000228140 CEP164Q9UPV0 1460 aa19.45■□□□□ 0.7
RPS13-201ENST00000228140 WDR62O43379 1518 aa19.45■□□□□ 0.7
RPS13-201ENST00000228140 CFTRP13569 1480 aa19.44■□□□□ 0.7
RPS13-201ENST00000228140 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
RPS13-201ENST00000228140 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
RPS13-201ENST00000228140 URB2Q14146 1524 aaKnown RBP19.21■□□□□ 0.67
RPS13-201ENST00000228140 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
RPS13-201ENST00000228140 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
RPS13-201ENST00000228140 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
RPS13-201ENST00000228140 IFT140Q96RY7 1462 aa19.04■□□□□ 0.64
RPS13-201ENST00000228140 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
RPS13-201ENST00000228140 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
RPS13-201ENST00000228140 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
RPS13-201ENST00000228140 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
RPS13-201ENST00000228140 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
RPS13-201ENST00000228140 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
RPS13-201ENST00000228140 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.6
RPS13-201ENST00000228140 CHD1O14646 1710 aa18.8■□□□□ 0.6
RPS13-201ENST00000228140 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
RPS13-201ENST00000228140 CUX1P39880 1505 aa18.78■□□□□ 0.6
RPS13-201ENST00000228140 SOGA1O94964 1423 aa18.76■□□□□ 0.59
RPS13-201ENST00000228140 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.592e-8■■■■■ 39.2
RPS13-201ENST00000228140 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
RPS13-201ENST00000228140 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
RPS13-201ENST00000228140 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
RPS13-201ENST00000228140 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
RPS13-201ENST00000228140 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
RPS13-201ENST00000228140 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
RPS13-201ENST00000228140 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
RPS13-201ENST00000228140 MAGI1Q96QZ7 1491 aaPredicted RBP18.65■□□□□ 0.58
RPS13-201ENST00000228140 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
RPS13-201ENST00000228140 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
RPS13-201ENST00000228140 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
RPS13-201ENST00000228140 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
RPS13-201ENST00000228140 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
RPS13-201ENST00000228140 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
RPS13-201ENST00000228140 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
RPS13-201ENST00000228140 FBLN2P98095 1184 aa18.59■□□□□ 0.57
RPS13-201ENST00000228140 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
RPS13-201ENST00000228140 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
RPS13-201ENST00000228140 SYNJ2O15056 1496 aa18.56■□□□□ 0.56
RPS13-201ENST00000228140 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.562e-9■□□□□ 10.3
RPS13-201ENST00000228140 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
RPS13-201ENST00000228140 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.56
RPS13-201ENST00000228140 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
RPS13-201ENST00000228140 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
RPS13-201ENST00000228140 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
RPS13-201ENST00000228140 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
RPS13-201ENST00000228140 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
RPS13-201ENST00000228140 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
RPS13-201ENST00000228140 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
RPS13-201ENST00000228140 NUP160Q12769 1436 aa18.3■□□□□ 0.52
RPS13-201ENST00000228140 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
RPS13-201ENST00000228140 CUL7Q14999 1698 aa18.25■□□□□ 0.51
RPS13-201ENST00000228140 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
RPS13-201ENST00000228140 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
RPS13-201ENST00000228140 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
RPS13-201ENST00000228140 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
RPS13-201ENST00000228140 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms