Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDHD3Q9BSH5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 REXO1L9P-201ENST00000604264 2108 ntBASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDHD3Q9BSH5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
HDHD3Q9BSH5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.64■□□□□ 0.1
HDHD3Q9BSH5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 AC134043.2-201ENST00000624206 2238 ntBASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 ESRRAP1-201ENST00000400596 1257 ntBASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 AC008556.1-201ENST00000610908 2040 ntBASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 AC110285.5-201ENST00000611501 352 ntBASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 HTR7P1-201ENST00000538670 1336 ntBASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HDHD3Q9BSH5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 AC004951.3-201ENST00000418645 1148 ntBASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 AC008040.2-201ENST00000461049 708 ntBASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
HDHD3Q9BSH5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms