RNA–Protein interactions for RNA: ENST00000461049.1

AC008040.2-201, humanhuman

BASIC

Gene AC008040.2, Length 708 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008040.2-201ENST00000461049 NISCHQ9Y2I1 1504 aa46.32■■■■■ 5.01
AC008040.2-201ENST00000461049 CCDC180Q9P1Z9 1646 aa40.82■■■■■ 4.12
AC008040.2-201ENST00000461049 ABCC9O60706 1549 aa40.04■■■■■ 4
AC008040.2-201ENST00000461049 DCAF8L2P0C7V8 631 aa38.77■■■■□ 3.8
AC008040.2-201ENST00000461049 ZCCHC6Q5VYS8 1495 aaKnown RBP38.61■■■■□ 3.77
AC008040.2-201ENST00000461049 NACADO15069 1562 aa38.44■■■■□ 3.74
AC008040.2-201ENST00000461049 RB1CC1Q8TDY2 1594 aa38.4■■■■□ 3.74
AC008040.2-201ENST00000461049 MYO15BQ96JP2 1530 aa38.28■■■■□ 3.72
AC008040.2-201ENST00000461049 DCAF1Q9Y4B6 1507 aa38.23■■■■□ 3.71
AC008040.2-201ENST00000461049 PABPN1Q86U42 306 aaKnown RBP eCLIP37.61■■■■□ 3.61
AC008040.2-201ENST00000461049 UNC13AQ9UPW8 1703 aa37.47■■■■□ 3.59
AC008040.2-201ENST00000461049 SCRIBQ14160 1630 aa37.46■■■■□ 3.59
AC008040.2-201ENST00000461049 BICRAQ9NZM4 1560 aa37.39■■■■□ 3.58
AC008040.2-201ENST00000461049 SHROOM4Q9ULL8 1493 aa36.9■■■■□ 3.5
AC008040.2-201ENST00000461049 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
AC008040.2-201ENST00000461049 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
AC008040.2-201ENST00000461049 CECR2Q9BXF3 1484 aa36.2■■■■□ 3.39
AC008040.2-201ENST00000461049 CC2D2AQ9P2K1 1620 aa36.12■■■■□ 3.37
AC008040.2-201ENST00000461049 SMARCA4P51532 1647 aa35.81■■■■□ 3.32
AC008040.2-201ENST00000461049 BAZ1AQ9NRL2 1556 aaPredicted RBP35.78■■■■□ 3.32
AC008040.2-201ENST00000461049 MROH2BQ7Z745 1585 aa35.77■■■■□ 3.32
AC008040.2-201ENST00000461049 ATAD2BQ9ULI0 1458 aa35.68■■■■□ 3.3
AC008040.2-201ENST00000461049 NCAPD3P42695 1498 aa35.6■■■■□ 3.29
AC008040.2-201ENST00000461049 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
AC008040.2-201ENST00000461049 RSF1Q96T23 1441 aaPredicted RBP35.48■■■■□ 3.27
AC008040.2-201ENST00000461049 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
AC008040.2-201ENST00000461049 HMGXB3Q12766 1538 aa35.32■■■■□ 3.24
AC008040.2-201ENST00000461049 BAZ1BQ9UIG0 1483 aaKnown RBP35.31■■■■□ 3.24
AC008040.2-201ENST00000461049 WIZO95785 1651 aa35.3■■■■□ 3.24
AC008040.2-201ENST00000461049 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
AC008040.2-201ENST00000461049 SUPT5HO00267 1087 aaKnown RBP34.83■■■■□ 3.17
AC008040.2-201ENST00000461049 NESP48681 1621 aa34.76■■■■□ 3.15
AC008040.2-201ENST00000461049 CCDC88BA6NC98 1476 aa34.63■■■■□ 3.13
AC008040.2-201ENST00000461049 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
AC008040.2-201ENST00000461049 LAMC3Q9Y6N6 1575 aa34.47■■■■□ 3.11
AC008040.2-201ENST00000461049 CFTRP13569 1480 aa34.42■■■■□ 3.1
AC008040.2-201ENST00000461049 ERCC6Q03468 1493 aa34.38■■■■□ 3.09
AC008040.2-201ENST00000461049 PDS5BQ9NTI5 1447 aa34.33■■■■□ 3.09
AC008040.2-201ENST00000461049 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
AC008040.2-201ENST00000461049 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
AC008040.2-201ENST00000461049 CEP164Q9UPV0 1460 aa34.03■■■■□ 3.04
AC008040.2-201ENST00000461049 THOC2Q8NI27 1593 aaKnown RBP34■■■■□ 3.03
AC008040.2-201ENST00000461049 MRC2Q9UBG0 1479 aa33.96■■■■□ 3.03
AC008040.2-201ENST00000461049 CUX2O14529 1486 aa33.89■■■■□ 3.02
AC008040.2-201ENST00000461049 URB2Q14146 1524 aaKnown RBP33.85■■■■□ 3.01
AC008040.2-201ENST00000461049 WDR62O43379 1518 aa33.82■■■■□ 3
AC008040.2-201ENST00000461049 PRDM2Q13029 1718 aa33.82■■■■□ 3
AC008040.2-201ENST00000461049 TOPBP1Q92547 1522 aa33.64■■■□□ 2.98
AC008040.2-201ENST00000461049 DNMBPQ6XZF7 1577 aa33.54■■■□□ 2.96
AC008040.2-201ENST00000461049 ABCC8Q09428 1581 aa33.53■■■□□ 2.96
AC008040.2-201ENST00000461049 CUX1P39880 1505 aa33.52■■■□□ 2.96
AC008040.2-201ENST00000461049 POLA1P09884 1462 aaPredicted RBP33.39■■■□□ 2.94
AC008040.2-201ENST00000461049 WRNQ14191 1432 aaPredicted RBP eCLIP33.36■■■□□ 2.93
AC008040.2-201ENST00000461049 IFT140Q96RY7 1462 aa33.34■■■□□ 2.93
AC008040.2-201ENST00000461049 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
AC008040.2-201ENST00000461049 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
AC008040.2-201ENST00000461049 ZNF608Q9ULD9 1512 aaPredicted RBP33.3■■■□□ 2.92
AC008040.2-201ENST00000461049 SOGA1O94964 1423 aa33.29■■■□□ 2.92
AC008040.2-201ENST00000461049 SYNJ1O43426 1573 aa33.26■■■□□ 2.91
AC008040.2-201ENST00000461049 TARBP1Q13395 1621 aaKnown RBP33.21■■■□□ 2.91
AC008040.2-201ENST00000461049 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
AC008040.2-201ENST00000461049 AQRO60306 1485 aaKnown RBP eCLIP33.15■■■□□ 2.9
AC008040.2-201ENST00000461049 TDRD9Q8NDG6 1382 aaKnown RBP33.15■■■□□ 2.9
AC008040.2-201ENST00000461049 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
AC008040.2-201ENST00000461049 ABCA10Q8WWZ4 1543 aa33■■■□□ 2.87
AC008040.2-201ENST00000461049 EIF4G3O43432 1585 aaKnown RBP32.98■■■□□ 2.87
AC008040.2-201ENST00000461049 WDR97A6NE52 1622 aa32.88■■■□□ 2.85
AC008040.2-201ENST00000461049 GAPVD1Q14C86 1478 aa32.86■■■□□ 2.85
AC008040.2-201ENST00000461049 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
AC008040.2-201ENST00000461049 TRIM41Q8WV44 630 aa32.8■■■□□ 2.84
AC008040.2-201ENST00000461049 DNAJC5Q9H3Z4 198 aa32.79■■■□□ 2.84
AC008040.2-201ENST00000461049 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
AC008040.2-201ENST00000461049 SNAPC4Q5SXM2 1469 aa32.76■■■□□ 2.84
AC008040.2-201ENST00000461049 FBLN2P98095 1184 aa32.7■■■□□ 2.83
AC008040.2-201ENST00000461049 OSCARQ8IYS5 282 aa32.68■■■□□ 2.82
AC008040.2-201ENST00000461049 CHIC1Q5VXU3 224 aa32.67■■■□□ 2.82
AC008040.2-201ENST00000461049 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
AC008040.2-201ENST00000461049 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
AC008040.2-201ENST00000461049 IGF1RP08069 1367 aa32.61■■■□□ 2.81
AC008040.2-201ENST00000461049 CHMP7Q8WUX9 453 aaPredicted RBP32.61■■■□□ 2.81
AC008040.2-201ENST00000461049 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
AC008040.2-201ENST00000461049 PBRM1Q86U86 1689 aa32.57■■■□□ 2.8
AC008040.2-201ENST00000461049 SYNJ2O15056 1496 aa32.54■■■□□ 2.8
AC008040.2-201ENST00000461049 ERICH3Q5RHP9 1530 aa32.54■■■□□ 2.8
AC008040.2-201ENST00000461049 FHAD1B1AJZ9 1412 aa32.49■■■□□ 2.79
AC008040.2-201ENST00000461049 CHD1O14646 1710 aa32.46■■■□□ 2.79
AC008040.2-201ENST00000461049 ADAMTS12P58397 1594 aa32.45■■■□□ 2.79
AC008040.2-201ENST00000461049 GRIN2AQ12879 1464 aa32.38■■■□□ 2.77
AC008040.2-201ENST00000461049 CARMIL1Q5VZK9 1371 aa32.35■■■□□ 2.77
AC008040.2-201ENST00000461049 NUP160Q12769 1436 aa32.27■■■□□ 2.76
AC008040.2-201ENST00000461049 CLASP1Q7Z460 1538 aa32.24■■■□□ 2.75
AC008040.2-201ENST00000461049 FAM9AQ8IZU1 332 aaPredicted RBP32.23■■■□□ 2.75
AC008040.2-201ENST00000461049 CEP170Q5SW79 1584 aa32.22■■■□□ 2.75
AC008040.2-201ENST00000461049 CSRNP3Q8WYN3 585 aa32.2■■■□□ 2.75
AC008040.2-201ENST00000461049 CUL7Q14999 1698 aa32.18■■■□□ 2.74
AC008040.2-201ENST00000461049 PRXQ9BXM0 1461 aa32.11■■■□□ 2.73
AC008040.2-201ENST00000461049 RAPGEF2Q9Y4G8 1499 aa32.11■■■□□ 2.73
AC008040.2-201ENST00000461049 ARHGEF11O15085 1522 aa32.07■■■□□ 2.72
AC008040.2-201ENST00000461049 EEA1Q15075 1411 aa32.07■■■□□ 2.72
AC008040.2-201ENST00000461049 JPH4Q96JJ6 628 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms