RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 NISCHQ9Y2I1 1504 aa42.39■■■■■ 4.38
SEC61A2-201ENST00000298428 CCDC180Q9P1Z9 1646 aa37.06■■■■□ 3.52
SEC61A2-201ENST00000298428 ZCCHC6Q5VYS8 1495 aaKnown RBP35.58■■■■□ 3.29
SEC61A2-201ENST00000298428 ABCC9O60706 1549 aa35.21■■■■□ 3.23
SEC61A2-201ENST00000298428 DCAF8L2P0C7V8 631 aa35.06■■■■□ 3.2
SEC61A2-201ENST00000298428 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
SEC61A2-201ENST00000298428 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
SEC61A2-201ENST00000298428 NACADO15069 1562 aa34.56■■■■□ 3.12
SEC61A2-201ENST00000298428 SHROOM4Q9ULL8 1493 aa34.44■■■■□ 3.1
SEC61A2-201ENST00000298428 RB1CC1Q8TDY2 1594 aa34.32■■■■□ 3.08
SEC61A2-201ENST00000298428 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
SEC61A2-201ENST00000298428 UNC13AQ9UPW8 1703 aa33.6■■■□□ 2.97
SEC61A2-201ENST00000298428 BICRAQ9NZM4 1560 aa33.27■■■□□ 2.92
SEC61A2-201ENST00000298428 PABPN1Q86U42 306 aaKnown RBP eCLIP33.16■■■□□ 2.9
SEC61A2-201ENST00000298428 SUPT5HO00267 1087 aaKnown RBP33.04■■■□□ 2.88
SEC61A2-201ENST00000298428 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.86
SEC61A2-201ENST00000298428 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
SEC61A2-201ENST00000298428 BAZ1AQ9NRL2 1556 aaPredicted RBP32.76■■■□□ 2.83
SEC61A2-201ENST00000298428 MROH2BQ7Z745 1585 aa32.74■■■□□ 2.83
SEC61A2-201ENST00000298428 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
SEC61A2-201ENST00000298428 WIZO95785 1651 aa32.46■■■□□ 2.79
SEC61A2-201ENST00000298428 EIF4G1Q04637 1599 aaKnown RBP32.3■■■□□ 2.76
SEC61A2-201ENST00000298428 PEG3Q9GZU2 1588 aa32.24■■■□□ 2.75
SEC61A2-201ENST00000298428 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
SEC61A2-201ENST00000298428 TOP2AP11388 1531 aaKnown RBP32.13■■■□□ 2.73
SEC61A2-201ENST00000298428 SMARCA2P51531 1590 aa32.13■■■□□ 2.73
SEC61A2-201ENST00000298428 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
SEC61A2-201ENST00000298428 NCAPD3P42695 1498 aa31.89■■■□□ 2.7
SEC61A2-201ENST00000298428 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
SEC61A2-201ENST00000298428 HMGXB3Q12766 1538 aa31.85■■■□□ 2.69
SEC61A2-201ENST00000298428 CCDC88BA6NC98 1476 aa31.79■■■□□ 2.68
SEC61A2-201ENST00000298428 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
SEC61A2-201ENST00000298428 DNAJC5BQ9UF47 199 aa31.18■■■□□ 2.58
SEC61A2-201ENST00000298428 CFTRP13569 1480 aa31.14■■■□□ 2.57
SEC61A2-201ENST00000298428 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
SEC61A2-201ENST00000298428 ABCC8Q09428 1581 aa31.07■■■□□ 2.56
SEC61A2-201ENST00000298428 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
SEC61A2-201ENST00000298428 PRDM2Q13029 1718 aa30.97■■■□□ 2.55
SEC61A2-201ENST00000298428 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
SEC61A2-201ENST00000298428 NESP48681 1621 aa30.85■■■□□ 2.53
SEC61A2-201ENST00000298428 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
SEC61A2-201ENST00000298428 SYNJ1O43426 1573 aa30.77■■■□□ 2.52
SEC61A2-201ENST00000298428 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
SEC61A2-201ENST00000298428 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
SEC61A2-201ENST00000298428 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.49
SEC61A2-201ENST00000298428 CUX1P39880 1505 aa30.63■■■□□ 2.49
SEC61A2-201ENST00000298428 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
SEC61A2-201ENST00000298428 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
SEC61A2-201ENST00000298428 FAM9AQ8IZU1 332 aaPredicted RBP30.5■■■□□ 2.47
SEC61A2-201ENST00000298428 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
SEC61A2-201ENST00000298428 SOGA1O94964 1423 aa30.44■■■□□ 2.46
SEC61A2-201ENST00000298428 DNMBPQ6XZF7 1577 aa30.42■■■□□ 2.46
SEC61A2-201ENST00000298428 TOPBP1Q92547 1522 aa30.37■■■□□ 2.45
SEC61A2-201ENST00000298428 EEA1Q15075 1411 aa30.36■■■□□ 2.45
SEC61A2-201ENST00000298428 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
SEC61A2-201ENST00000298428 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
SEC61A2-201ENST00000298428 RUSC2Q8N2Y8 1516 aa30.33■■■□□ 2.45
SEC61A2-201ENST00000298428 LOC105371045A0A1W2PR82 267 aa30.29■■■□□ 2.44
SEC61A2-201ENST00000298428 MRC2Q9UBG0 1479 aa30.24■■■□□ 2.43
SEC61A2-201ENST00000298428 ERCC6Q03468 1493 aa30.23■■■□□ 2.43
SEC61A2-201ENST00000298428 POLA1P09884 1462 aaPredicted RBP30.21■■■□□ 2.43
SEC61A2-201ENST00000298428 CSRNP3Q8WYN3 585 aa30.19■■■□□ 2.42
SEC61A2-201ENST00000298428 KIF27Q86VH2 1401 aa30.14■■■□□ 2.42
SEC61A2-201ENST00000298428 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
SEC61A2-201ENST00000298428 CUX2O14529 1486 aa30.1■■■□□ 2.41
SEC61A2-201ENST00000298428 WDR62O43379 1518 aa30.09■■■□□ 2.41
SEC61A2-201ENST00000298428 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
SEC61A2-201ENST00000298428 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
SEC61A2-201ENST00000298428 THOC2Q8NI27 1593 aaKnown RBP30.04■■■□□ 2.4
SEC61A2-201ENST00000298428 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
SEC61A2-201ENST00000298428 KIF21BO75037 1637 aa29.97■■■□□ 2.39
SEC61A2-201ENST00000298428 GOLGA3Q08378 1498 aa29.94■■■□□ 2.38
SEC61A2-201ENST00000298428 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
SEC61A2-201ENST00000298428 PRXQ9BXM0 1461 aa29.87■■■□□ 2.37
SEC61A2-201ENST00000298428 IGF1RP08069 1367 aa29.87■■■□□ 2.37
SEC61A2-201ENST00000298428 IFT140Q96RY7 1462 aa29.84■■■□□ 2.37
SEC61A2-201ENST00000298428 RAPGEF2Q9Y4G8 1499 aa29.84■■■□□ 2.37
SEC61A2-201ENST00000298428 ABCA5Q8WWZ7 1642 aa29.83■■■□□ 2.37
SEC61A2-201ENST00000298428 TDRD9Q8NDG6 1382 aaKnown RBP29.82■■■□□ 2.37
SEC61A2-201ENST00000298428 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
SEC61A2-201ENST00000298428 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
SEC61A2-201ENST00000298428 TNIKQ9UKE5 1360 aa29.79■■■□□ 2.36
SEC61A2-201ENST00000298428 GAPVD1Q14C86 1478 aa29.78■■■□□ 2.36
SEC61A2-201ENST00000298428 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
SEC61A2-201ENST00000298428 CUL7Q14999 1698 aa29.69■■■□□ 2.34
SEC61A2-201ENST00000298428 AQRO60306 1485 aaKnown RBP eCLIP29.67■■■□□ 2.34
SEC61A2-201ENST00000298428 ZNF608Q9ULD9 1512 aaPredicted RBP29.67■■■□□ 2.34
SEC61A2-201ENST00000298428 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
SEC61A2-201ENST00000298428 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
SEC61A2-201ENST00000298428 EIF4G3O43432 1585 aaKnown RBP29.58■■■□□ 2.33
SEC61A2-201ENST00000298428 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
SEC61A2-201ENST00000298428 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
SEC61A2-201ENST00000298428 FHAD1B1AJZ9 1412 aa29.46■■■□□ 2.31
SEC61A2-201ENST00000298428 CLIP1P30622 1438 aa29.45■■■□□ 2.3
SEC61A2-201ENST00000298428 SNAPC4Q5SXM2 1469 aa29.41■■■□□ 2.3
SEC61A2-201ENST00000298428 RANGAP1P46060 587 aaPredicted RBP29.38■■■□□ 2.29
SEC61A2-201ENST00000298428 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
SEC61A2-201ENST00000298428 CTTNBP2Q8WZ74 1663 aa29.32■■■□□ 2.28
SEC61A2-201ENST00000298428 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
SEC61A2-201ENST00000298428 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms