RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 NISCHQ9Y2I1 1504 aa49.05■■■■■ 5.44
RALGPS1-206ENST00000394011 CCDC180Q9P1Z9 1646 aa43.95■■■■■ 4.63
RALGPS1-206ENST00000394011 ABCC9O60706 1549 aa43.7■■■■■ 4.59
RALGPS1-206ENST00000394011 RB1CC1Q8TDY2 1594 aa41.68■■■■■ 4.26
RALGPS1-206ENST00000394011 NACADO15069 1562 aa41.47■■■■■ 4.23
RALGPS1-206ENST00000394011 DCAF8L2P0C7V8 631 aa41.1■■■■■ 4.17
RALGPS1-206ENST00000394011 MYO15BQ96JP2 1530 aa41.01■■■■■ 4.16
RALGPS1-206ENST00000394011 DNAJC5BQ9UF47 199 aa40.92■■■■■ 4.14
RALGPS1-206ENST00000394011 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
RALGPS1-206ENST00000394011 ZCCHC6Q5VYS8 1495 aaKnown RBP40.71■■■■■ 4.11
RALGPS1-206ENST00000394011 PABPN1Q86U42 306 aaKnown RBP eCLIP40.69■■■■■ 4.1
RALGPS1-206ENST00000394011 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
RALGPS1-206ENST00000394011 DCAF1Q9Y4B6 1507 aa40.55■■■■■ 4.08
RALGPS1-206ENST00000394011 SCRIBQ14160 1630 aa40.02■■■■■ 4
RALGPS1-206ENST00000394011 SHROOM4Q9ULL8 1493 aa39.96■■■■□ 3.99
RALGPS1-206ENST00000394011 CC2D2AQ9P2K1 1620 aa39.54■■■■□ 3.92
RALGPS1-206ENST00000394011 EIF4G1Q04637 1599 aaKnown RBP39.5■■■■□ 3.91
RALGPS1-206ENST00000394011 CECR2Q9BXF3 1484 aa39.35■■■■□ 3.89
RALGPS1-206ENST00000394011 NCAPD3P42695 1498 aa38.3■■■■□ 3.72
RALGPS1-206ENST00000394011 SMARCA4P51532 1647 aa38.23■■■■□ 3.71
RALGPS1-206ENST00000394011 ATAD2BQ9ULI0 1458 aa38.22■■■■□ 3.71
RALGPS1-206ENST00000394011 SMARCA2P51531 1590 aa38.07■■■■□ 3.69
RALGPS1-206ENST00000394011 HMGXB3Q12766 1538 aa38.04■■■■□ 3.68
RALGPS1-206ENST00000394011 BAZ1AQ9NRL2 1556 aaPredicted RBP38.02■■■■□ 3.68
RALGPS1-206ENST00000394011 PEG3Q9GZU2 1588 aa37.9■■■■□ 3.66
RALGPS1-206ENST00000394011 MROH2BQ7Z745 1585 aa37.81■■■■□ 3.64
RALGPS1-206ENST00000394011 BAZ1BQ9UIG0 1483 aaKnown RBP37.78■■■■□ 3.64
RALGPS1-206ENST00000394011 NESP48681 1621 aa37.65■■■■□ 3.62
RALGPS1-206ENST00000394011 ERCC6Q03468 1493 aa37.64■■■■□ 3.62
RALGPS1-206ENST00000394011 DNAJC5Q9H3Z4 198 aa37.6■■■■□ 3.61
RALGPS1-206ENST00000394011 CUX2O14529 1486 aa37.59■■■■□ 3.61
RALGPS1-206ENST00000394011 LAMC3Q9Y6N6 1575 aa37.39■■■■□ 3.58
RALGPS1-206ENST00000394011 WIZO95785 1651 aa37.37■■■■□ 3.57
RALGPS1-206ENST00000394011 THOC2Q8NI27 1593 aaKnown RBP37.27■■■■□ 3.56
RALGPS1-206ENST00000394011 KIF21AQ7Z4S6 1674 aa37.19■■■■□ 3.54
RALGPS1-206ENST00000394011 CADPSQ9ULU8 1353 aa37.1■■■■□ 3.53
RALGPS1-206ENST00000394011 PDS5BQ9NTI5 1447 aa37.1■■■■□ 3.53
RALGPS1-206ENST00000394011 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
RALGPS1-206ENST00000394011 TOP2AP11388 1531 aaKnown RBP36.89■■■■□ 3.5
RALGPS1-206ENST00000394011 MRC2Q9UBG0 1479 aa36.82■■■■□ 3.48
RALGPS1-206ENST00000394011 WDR62O43379 1518 aa36.78■■■■□ 3.48
RALGPS1-206ENST00000394011 CFTRP13569 1480 aa36.76■■■■□ 3.48
RALGPS1-206ENST00000394011 FANCD2Q9BXW9 1451 aa36.69■■■■□ 3.46
RALGPS1-206ENST00000394011 CEP164Q9UPV0 1460 aa36.69■■■■□ 3.46
RALGPS1-206ENST00000394011 CCDC88BA6NC98 1476 aa36.47■■■■□ 3.43
RALGPS1-206ENST00000394011 PRDM2Q13029 1718 aa36.46■■■■□ 3.43
RALGPS1-206ENST00000394011 URB2Q14146 1524 aaKnown RBP36.43■■■■□ 3.42
RALGPS1-206ENST00000394011 TOPBP1Q92547 1522 aa36.04■■■■□ 3.36
RALGPS1-206ENST00000394011 IFT140Q96RY7 1462 aa35.95■■■■□ 3.35
RALGPS1-206ENST00000394011 ZNF608Q9ULD9 1512 aaPredicted RBP35.93■■■■□ 3.34
RALGPS1-206ENST00000394011 DNMBPQ6XZF7 1577 aa35.92■■■■□ 3.34
RALGPS1-206ENST00000394011 ABCC8Q09428 1581 aa35.91■■■■□ 3.34
RALGPS1-206ENST00000394011 OSCARQ8IYS5 282 aa35.83■■■■□ 3.33
RALGPS1-206ENST00000394011 TARBP1Q13395 1621 aaKnown RBP35.76■■■■□ 3.32
RALGPS1-206ENST00000394011 EIF4G3O43432 1585 aaKnown RBP35.74■■■■□ 3.31
RALGPS1-206ENST00000394011 POLA1P09884 1462 aaPredicted RBP35.69■■■■□ 3.3
RALGPS1-206ENST00000394011 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
RALGPS1-206ENST00000394011 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.29
RALGPS1-206ENST00000394011 RAD54L2Q9Y4B4 1467 aa35.54■■■■□ 3.28
RALGPS1-206ENST00000394011 CUX1P39880 1505 aa35.52■■■■□ 3.28
RALGPS1-206ENST00000394011 FGD5Q6ZNL6 1462 aa35.48■■■■□ 3.27
RALGPS1-206ENST00000394011 SOGA1O94964 1423 aa35.47■■■■□ 3.27
RALGPS1-206ENST00000394011 RIMBP3CA6NJZ7 1639 aa35.46■■■■□ 3.27
RALGPS1-206ENST00000394011 RIMBP3BA6NNM3 1639 aa35.46■■■■□ 3.27
RALGPS1-206ENST00000394011 RIMBP3Q9UFD9 1639 aa35.46■■■■□ 3.27
RALGPS1-206ENST00000394011 CHD1O14646 1710 aa35.46■■■■□ 3.27
RALGPS1-206ENST00000394011 SUPT5HO00267 1087 aaKnown RBP35.41■■■■□ 3.26
RALGPS1-206ENST00000394011 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
RALGPS1-206ENST00000394011 WDR97A6NE52 1622 aa35.36■■■■□ 3.25
RALGPS1-206ENST00000394011 ARHGEF11O15085 1522 aa35.36■■■■□ 3.25
RALGPS1-206ENST00000394011 SNAPC4Q5SXM2 1469 aa35.24■■■■□ 3.23
RALGPS1-206ENST00000394011 FBLN2P98095 1184 aa35.18■■■■□ 3.22
RALGPS1-206ENST00000394011 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
RALGPS1-206ENST00000394011 MAGI1Q96QZ7 1491 aaPredicted RBP35.15■■■■□ 3.22
RALGPS1-206ENST00000394011 PBRM1Q86U86 1689 aa35.1■■■■□ 3.21
RALGPS1-206ENST00000394011 ABCA10Q8WWZ4 1543 aa35.1■■■■□ 3.21
RALGPS1-206ENST00000394011 CLASP1Q7Z460 1538 aa35.07■■■■□ 3.21
RALGPS1-206ENST00000394011 ABCA5Q8WWZ7 1642 aa35.07■■■■□ 3.21
RALGPS1-206ENST00000394011 GAPVD1Q14C86 1478 aa35.05■■■■□ 3.2
RALGPS1-206ENST00000394011 ARAP1Q96P48 1450 aa35.04■■■■□ 3.2
RALGPS1-206ENST00000394011 SYNJ2O15056 1496 aa35.03■■■■□ 3.2
RALGPS1-206ENST00000394011 BIVM-ERCC5R4GMW8 1640 aa35.01■■■■□ 3.19
RALGPS1-206ENST00000394011 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
RALGPS1-206ENST00000394011 CYB5RLQ6IPT4 315 aa34.98■■■■□ 3.19
RALGPS1-206ENST00000394011 CHMP7Q8WUX9 453 aaPredicted RBP34.98■■■■□ 3.19
RALGPS1-206ENST00000394011 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
RALGPS1-206ENST00000394011 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
RALGPS1-206ENST00000394011 ADAMTS12P58397 1594 aa34.77■■■■□ 3.16
RALGPS1-206ENST00000394011 GRIN2AQ12879 1464 aa34.72■■■■□ 3.15
RALGPS1-206ENST00000394011 CEP170Q5SW79 1584 aa34.65■■■■□ 3.14
RALGPS1-206ENST00000394011 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
RALGPS1-206ENST00000394011 NUP160Q12769 1436 aa34.64■■■■□ 3.14
RALGPS1-206ENST00000394011 FHAD1B1AJZ9 1412 aa34.62■■■■□ 3.13
RALGPS1-206ENST00000394011 ERCC6L2Q5T890 1561 aa34.56■■■■□ 3.12
RALGPS1-206ENST00000394011 SHROOM2Q13796 1616 aa34.51■■■■□ 3.11
RALGPS1-206ENST00000394011 TRHP20396 242 aaPredicted RBP34.45■■■■□ 3.11
RALGPS1-206ENST00000394011 RUSC2Q8N2Y8 1516 aa34.29■■■■□ 3.08
RALGPS1-206ENST00000394011 IGF1RP08069 1367 aa34.25■■■■□ 3.07
RALGPS1-206ENST00000394011 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
RALGPS1-206ENST00000394011 PRG4Q92954 1404 aaPredicted RBP34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms