Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 AC004951.3-201ENST00000418645 1148 ntBASIC16.67■□□□□ 0.26
PTP4A1Q93096 AL353807.1-201ENST00000427475 662 ntBASIC16.67■□□□□ 0.26
PTP4A1Q93096 AC008040.2-201ENST00000461049 708 ntBASIC16.67■□□□□ 0.26
PTP4A1Q93096 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 RARRES2P10-201ENST00000564312 460 ntBASIC16.67■□□□□ 0.26
PTP4A1Q93096 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 HTR7P1-201ENST00000538670 1336 ntBASIC16.67■□□□□ 0.26
PTP4A1Q93096 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTP4A1Q93096 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTP4A1Q93096 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 RCC2P3-201ENST00000418112 1537 ntBASIC16.66■□□□□ 0.26
PTP4A1Q93096 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 KSR1P1-201ENST00000446298 240 ntBASIC16.66■□□□□ 0.26
PTP4A1Q93096 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 AC098590.1-201ENST00000468126 897 ntBASIC16.66■□□□□ 0.26
PTP4A1Q93096 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTP4A1Q93096 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PTP4A1Q93096 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 MYLKP1-201ENST00000509077 1580 ntBASIC16.65■□□□□ 0.26
PTP4A1Q93096 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 AL135905.2-201ENST00000584934 1404 ntBASIC16.65■□□□□ 0.26
PTP4A1Q93096 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.65■□□□□ 0.26
PTP4A1Q93096 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTP4A1Q93096 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms