Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 RBBP6-211ENST00000568316 556 ntTSL 537.93■■■■□ 3.668e-13■■□□□ 13.2
DROSHAQ9NRR4 RBBP6-210ENST00000568015 695 ntTSL 324.66■■□□□ 1.548e-13■■□□□ 13.2
DROSHAQ9NRR4 RBBP6-207ENST00000564314 3361 ntTSL 211.9□□□□□ -0.58e-13■■□□□ 13.2
DROSHAQ9NRR4 RBBP6-209ENST00000567686 1138 ntTSL 57.39□□□□□ -1.238e-13■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC41.83■■■■■ 4.297e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-207ENST00000414664 1070 ntTSL 538.72■■■■□ 3.797e-10■■□□□ 13.2
DROSHAQ9NRR4 RBM12-204ENST00000424458 1068 ntTSL 238.72■■■■□ 3.797e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-205ENST00000401607 1795 ntTSL 538.63■■■■□ 3.777e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-212ENST00000430570 1332 ntTSL 538.47■■■■□ 3.757e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-216ENST00000437340 1755 ntTSL 1 (best)38.33■■■■□ 3.737e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-217ENST00000439669 784 ntTSL 536.75■■■■□ 3.477e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-223ENST00000475146 627 ntTSL 336.75■■■■□ 3.477e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.257e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-220ENST00000458038 596 ntTSL 333.85■■■■□ 3.017e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-211ENST00000420363 821 ntTSL 232.92■■■□□ 2.867e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-219ENST00000440240 746 ntTSL 532.44■■■□□ 2.787e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 532.01■■■□□ 2.717e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-210ENST00000416778 744 ntTSL 227.6■■■□□ 2.017e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-213ENST00000434795 831 ntTSL 327.6■■■□□ 2.017e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-224ENST00000483359 1975 ntTSL 527.18■■□□□ 1.947e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-208ENST00000414711 673 ntTSL 526.25■■□□□ 1.797e-10■■□□□ 13.2
DROSHAQ9NRR4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC26.2■■□□□ 1.797e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-215ENST00000437100 826 ntTSL 522.76■■□□□ 1.237e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-206ENST00000412056 998 ntTSL 321.38■■□□□ 1.017e-10■■□□□ 13.2
DROSHAQ9NRR4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.817e-10■■□□□ 13.2
DROSHAQ9NRR4 RBM12-206ENST00000435161 565 ntTSL 418.49■□□□□ 0.557e-10■■□□□ 13.2
DROSHAQ9NRR4 RBM12-205ENST00000431148 583 ntTSL 417.68■□□□□ 0.427e-10■■□□□ 13.2
DROSHAQ9NRR4 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.127e-10■■□□□ 13.2
DROSHAQ9NRR4 CPNE1-218ENST00000439806 748 ntTSL 515.33■□□□□ 0.047e-10■■□□□ 13.2
DROSHAQ9NRR4 AL109827.1-202ENST00000441563 611 ntAPPRIS ALT2 TSL 215.15■□□□□ 0.027e-10■■□□□ 13.2
DROSHAQ9NRR4 AL109827.1-201ENST00000454607 679 ntAPPRIS ALT2 TSL 215.15■□□□□ 0.027e-10■■□□□ 13.2
DROSHAQ9NRR4 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.847e-10■■□□□ 13.2
DROSHAQ9NRR4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC22.38■■□□□ 1.175e-8■■□□□ 13.2
DROSHAQ9NRR4 GUSBP1-201ENST00000449061 758 ntBASIC17.82■□□□□ 0.445e-8■■□□□ 13.2
DROSHAQ9NRR4 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC10.64□□□□□ -0.715e-8■■□□□ 13.2
DROSHAQ9NRR4 PCF11-203ENST00000530304 2649 ntTSL 1 (best)27.97■■■□□ 2.071e-25■■□□□ 13.2
DROSHAQ9NRR4 PCF11-206ENST00000533018 580 ntTSL 327.74■■■□□ 2.031e-25■■□□□ 13.2
DROSHAQ9NRR4 PCF11-207ENST00000624931 1720 nt25.87■■□□□ 1.731e-25■■□□□ 13.2
DROSHAQ9NRR4 PCF11-204ENST00000530660 3309 ntTSL 218.63■□□□□ 0.571e-25■■□□□ 13.2
DROSHAQ9NRR4 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.221e-25■■□□□ 13.2
DROSHAQ9NRR4 GNB1L-204ENST00000453108 702 ntTSL 331.56■■■□□ 2.645e-7■■□□□ 13.2
DROSHAQ9NRR4 RTL10-204ENST00000416337 730 ntAPPRIS ALT2 TSL 229.97■■■□□ 2.395e-7■■□□□ 13.2
DROSHAQ9NRR4 RTL10-205ENST00000484072 1385 ntTSL 220.52■□□□□ 0.885e-7■■□□□ 13.2
DROSHAQ9NRR4 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.095e-7■■□□□ 13.2
DROSHAQ9NRR4 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.135e-7■■□□□ 13.2
DROSHAQ9NRR4 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.455e-7■■□□□ 13.2
DROSHAQ9NRR4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.348e-13■■□□□ 13.2
DROSHAQ9NRR4 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.848e-13■■□□□ 13.2
DROSHAQ9NRR4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.58e-13■■□□□ 13.2
DROSHAQ9NRR4 CDC42-205ENST00000498236 816 ntTSL 511.61□□□□□ -0.558e-13■■□□□ 13.2
DROSHAQ9NRR4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.627e-9■■□□□ 13.2
DROSHAQ9NRR4 EXOC3L4-207ENST00000560925 2341 ntTSL 234.84■■■■□ 3.177e-9■■□□□ 13.2
DROSHAQ9NRR4 EXOC3L4-206ENST00000560304 657 ntTSL 332.8■■■□□ 2.847e-9■■□□□ 13.2
DROSHAQ9NRR4 EXOC3L4-203ENST00000559661 665 ntTSL 527.48■■□□□ 1.997e-9■■□□□ 13.2
DROSHAQ9NRR4 EXOC3L4-204ENST00000559693 813 ntTSL 326.92■■□□□ 1.97e-9■■□□□ 13.2
DROSHAQ9NRR4 GOLGA3-204ENST00000534967 484 ntTSL 342.1■■■■■ 4.332e-6■■□□□ 13.2
DROSHAQ9NRR4 SRRM2-223ENST00000575701 860 ntTSL 338.86■■■■□ 3.812e-6■■□□□ 13.2
DROSHAQ9NRR4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.472e-8■■□□□ 13.2
DROSHAQ9NRR4 TMBIM1-211ENST00000440422 659 ntTSL 535.76■■■■□ 3.322e-6■■□□□ 13.2
DROSHAQ9NRR4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC35.44■■■■□ 3.262e-6■■□□□ 13.2
DROSHAQ9NRR4 CLIC4-204ENST00000497755 672 ntTSL 334.66■■■■□ 3.142e-6■■□□□ 13.2
DROSHAQ9NRR4 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)34.37■■■■□ 3.092e-8■■□□□ 13.2
DROSHAQ9NRR4 AMH-203ENST00000592877 534 ntTSL 334.25■■■■□ 3.072e-8■■□□□ 13.2
DROSHAQ9NRR4 AMH-202ENST00000589313 1686 ntTSL 534.23■■■■□ 3.072e-8■■□□□ 13.2
DROSHAQ9NRR4 KMT2D-203ENST00000547610 636 ntTSL 532.93■■■□□ 2.862e-6■■□□□ 13.2
DROSHAQ9NRR4 UBA1-206ENST00000442035 1054 ntTSL 532.45■■■□□ 2.782e-8■■□□□ 13.2
DROSHAQ9NRR4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.782e-6■■□□□ 13.2
DROSHAQ9NRR4 MIDN-203ENST00000586843 416 ntTSL 232.4■■■□□ 2.782e-6■■□□□ 13.2
DROSHAQ9NRR4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC31.66■■■□□ 2.662e-13■■□□□ 13.2
DROSHAQ9NRR4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.592e-6■■□□□ 13.2
DROSHAQ9NRR4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC30.88■■■□□ 2.532e-6■■□□□ 13.2
DROSHAQ9NRR4 PTDSS2-206ENST00000527325 723 ntTSL 330.62■■■□□ 2.492e-6■■□□□ 13.2
DROSHAQ9NRR4 MVD-210ENST00000565610 507 ntTSL 330.31■■■□□ 2.442e-6■■□□□ 13.2
DROSHAQ9NRR4 UBA6-205ENST00000506571 385 ntTSL 229.56■■■□□ 2.322e-7■■□□□ 13.2
DROSHAQ9NRR4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC29.46■■■□□ 2.312e-6■■□□□ 13.2
DROSHAQ9NRR4 NUCB1-212ENST00000492367 1515 ntTSL 228.92■■■□□ 2.222e-6■■□□□ 13.2
DROSHAQ9NRR4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.222e-8■■□□□ 13.2
DROSHAQ9NRR4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.162e-6■■□□□ 13.2
DROSHAQ9NRR4 STT3A-216ENST00000534472 1561 ntTSL 1 (best)28.11■■■□□ 2.092e-6■■□□□ 13.2
DROSHAQ9NRR4 GYPC-206ENST00000484700 766 ntTSL 527.97■■■□□ 2.072e-7■■□□□ 13.2
DROSHAQ9NRR4 TRIM41-203ENST00000503114 1904 ntTSL 1 (best)27.9■■■□□ 2.062e-8■■□□□ 13.2
DROSHAQ9NRR4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.052e-6■■□□□ 13.2
DROSHAQ9NRR4 TIMM44-205ENST00000597926 819 ntTSL 327.79■■■□□ 2.042e-6■■□□□ 13.2
DROSHAQ9NRR4 UBA1-208ENST00000457753 809 ntTSL 526.92■■□□□ 1.92e-8■■□□□ 13.2
DROSHAQ9NRR4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.882e-7■■□□□ 13.2
DROSHAQ9NRR4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.842e-13■■□□□ 13.2
DROSHAQ9NRR4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.812e-6■■□□□ 13.2
DROSHAQ9NRR4 GMPPA-207ENST00000443704 1783 ntTSL 526.31■■□□□ 1.82e-6■■□□□ 13.2
DROSHAQ9NRR4 RECQL4-205ENST00000532846 1055 ntTSL 526.25■■□□□ 1.792e-7■■□□□ 13.2
DROSHAQ9NRR4 RECQL4-208ENST00000534626 1165 ntTSL 526.16■■□□□ 1.782e-7■■□□□ 13.2
DROSHAQ9NRR4 SPSB3-202ENST00000563668 1509 ntTSL 225.98■■□□□ 1.752e-6■■□□□ 13.2
DROSHAQ9NRR4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC25.74■■□□□ 1.712e-7■■□□□ 13.2
DROSHAQ9NRR4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.682e-7■■□□□ 13.2
DROSHAQ9NRR4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.672e-6■■□□□ 13.2
DROSHAQ9NRR4 NDST1-202ENST00000518299 769 ntTSL 225.41■■□□□ 1.669e-7■■□□□ 13.2
DROSHAQ9NRR4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.612e-6■■□□□ 13.2
DROSHAQ9NRR4 CLIC4-203ENST00000489758 439 ntTSL 224.68■■□□□ 1.542e-6■■□□□ 13.2
DROSHAQ9NRR4 RAD54L-204ENST00000463715 718 ntTSL 524.67■■□□□ 1.542e-9■■□□□ 13.2
DROSHAQ9NRR4 GOLGA3-205ENST00000537317 298 ntTSL 324.12■■□□□ 1.452e-6■■□□□ 13.2
DROSHAQ9NRR4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC24.1■■□□□ 1.452e-6■■□□□ 13.2
Retrieved 100 of 16,331 protein–RNA pairs in 88.9 ms