RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 NISCHQ9Y2I1 1504 aa43.95■■■■■ 4.63
NUCB1-212ENST00000492367 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
NUCB1-212ENST00000492367 ZCCHC6Q5VYS8 1495 aaKnown RBP36.87■■■■□ 3.49
NUCB1-212ENST00000492367 ABCC9O60706 1549 aa36.63■■■■□ 3.45
NUCB1-212ENST00000492367 DCAF1Q9Y4B6 1507 aa36.45■■■■□ 3.42
NUCB1-212ENST00000492367 DCAF8L2P0C7V8 631 aa36.24■■■■□ 3.39
NUCB1-212ENST00000492367 MYO15BQ96JP2 1530 aa36.17■■■■□ 3.38
NUCB1-212ENST00000492367 NACADO15069 1562 aa36.03■■■■□ 3.36
NUCB1-212ENST00000492367 RB1CC1Q8TDY2 1594 aa35.81■■■■□ 3.32
NUCB1-212ENST00000492367 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
NUCB1-212ENST00000492367 SCRIBQ14160 1630 aa35.31■■■■□ 3.24
NUCB1-212ENST00000492367 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
NUCB1-212ENST00000492367 BICRAQ9NZM4 1560 aa34.6■■■■□ 3.13
NUCB1-212ENST00000492367 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
NUCB1-212ENST00000492367 CECR2Q9BXF3 1484 aa34.05■■■■□ 3.04
NUCB1-212ENST00000492367 BAZ1AQ9NRL2 1556 aaPredicted RBP34.03■■■■□ 3.04
NUCB1-212ENST00000492367 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
NUCB1-212ENST00000492367 SMARCA4P51532 1647 aa33.89■■■■□ 3.02
NUCB1-212ENST00000492367 RSF1Q96T23 1441 aaPredicted RBP33.88■■■■□ 3.01
NUCB1-212ENST00000492367 MROH2BQ7Z745 1585 aa33.87■■■■□ 3.01
NUCB1-212ENST00000492367 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
NUCB1-212ENST00000492367 WIZO95785 1651 aa33.59■■■□□ 2.97
NUCB1-212ENST00000492367 PEG3Q9GZU2 1588 aa33.53■■■□□ 2.96
NUCB1-212ENST00000492367 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
NUCB1-212ENST00000492367 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
NUCB1-212ENST00000492367 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
NUCB1-212ENST00000492367 CC2D2AQ9P2K1 1620 aa33.21■■■□□ 2.91
NUCB1-212ENST00000492367 BAZ1BQ9UIG0 1483 aaKnown RBP33.21■■■□□ 2.91
NUCB1-212ENST00000492367 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
NUCB1-212ENST00000492367 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
NUCB1-212ENST00000492367 CCDC88BA6NC98 1476 aa32.88■■■□□ 2.85
NUCB1-212ENST00000492367 DNAJC5BQ9UF47 199 aa32.45■■■□□ 2.78
NUCB1-212ENST00000492367 CFTRP13569 1480 aa32.33■■■□□ 2.77
NUCB1-212ENST00000492367 PRDM2Q13029 1718 aa32.3■■■□□ 2.76
NUCB1-212ENST00000492367 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
NUCB1-212ENST00000492367 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
NUCB1-212ENST00000492367 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
NUCB1-212ENST00000492367 ABCC8Q09428 1581 aa32.05■■■□□ 2.72
NUCB1-212ENST00000492367 NESP48681 1621 aa32.01■■■□□ 2.71
NUCB1-212ENST00000492367 TRIM41Q8WV44 630 aa32■■■□□ 2.71
NUCB1-212ENST00000492367 WRNQ14191 1432 aaPredicted RBP eCLIP31.97■■■□□ 2.71
NUCB1-212ENST00000492367 FANCD2Q9BXW9 1451 aa31.93■■■□□ 2.7
NUCB1-212ENST00000492367 PDS5BQ9NTI5 1447 aa31.91■■■□□ 2.7
NUCB1-212ENST00000492367 CEP164Q9UPV0 1460 aa31.81■■■□□ 2.68
NUCB1-212ENST00000492367 SYNJ1O43426 1573 aa31.81■■■□□ 2.68
NUCB1-212ENST00000492367 BIVM-ERCC5R4GMW8 1640 aa31.8■■■□□ 2.68
NUCB1-212ENST00000492367 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
NUCB1-212ENST00000492367 KIF21AQ7Z4S6 1674 aa31.74■■■□□ 2.67
NUCB1-212ENST00000492367 CUX1P39880 1505 aa31.71■■■□□ 2.67
NUCB1-212ENST00000492367 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
NUCB1-212ENST00000492367 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
NUCB1-212ENST00000492367 ERCC6Q03468 1493 aa31.55■■■□□ 2.64
NUCB1-212ENST00000492367 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
NUCB1-212ENST00000492367 URB2Q14146 1524 aaKnown RBP31.5■■■□□ 2.63
NUCB1-212ENST00000492367 FGD5Q6ZNL6 1462 aa31.45■■■□□ 2.63
NUCB1-212ENST00000492367 EEA1Q15075 1411 aa31.43■■■□□ 2.62
NUCB1-212ENST00000492367 WDR62O43379 1518 aa31.37■■■□□ 2.61
NUCB1-212ENST00000492367 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
NUCB1-212ENST00000492367 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
NUCB1-212ENST00000492367 SOGA1O94964 1423 aa31.34■■■□□ 2.61
NUCB1-212ENST00000492367 FAM9AQ8IZU1 332 aaPredicted RBP31.28■■■□□ 2.6
NUCB1-212ENST00000492367 KIF27Q86VH2 1401 aa31.22■■■□□ 2.59
NUCB1-212ENST00000492367 ABCA10Q8WWZ4 1543 aa31.2■■■□□ 2.59
NUCB1-212ENST00000492367 RUSC2Q8N2Y8 1516 aa31.2■■■□□ 2.58
NUCB1-212ENST00000492367 CUX2O14529 1486 aa31.18■■■□□ 2.58
NUCB1-212ENST00000492367 WDR97A6NE52 1622 aa31.17■■■□□ 2.58
NUCB1-212ENST00000492367 RAD54L2Q9Y4B4 1467 aa31.17■■■□□ 2.58
NUCB1-212ENST00000492367 CSRNP3Q8WYN3 585 aa31.14■■■□□ 2.57
NUCB1-212ENST00000492367 TARBP1Q13395 1621 aaKnown RBP31.11■■■□□ 2.57
NUCB1-212ENST00000492367 IFT140Q96RY7 1462 aa31.08■■■□□ 2.57
NUCB1-212ENST00000492367 KIF21BO75037 1637 aa31.01■■■□□ 2.55
NUCB1-212ENST00000492367 ABCA5Q8WWZ7 1642 aa31■■■□□ 2.55
NUCB1-212ENST00000492367 LOC105371045A0A1W2PR82 267 aa30.93■■■□□ 2.54
NUCB1-212ENST00000492367 GOLGA3Q08378 1498 aa30.92■■■□□ 2.54
NUCB1-212ENST00000492367 GAPVD1Q14C86 1478 aa30.92■■■□□ 2.54
NUCB1-212ENST00000492367 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
NUCB1-212ENST00000492367 IGF1RP08069 1367 aa30.88■■■□□ 2.53
NUCB1-212ENST00000492367 ERICH3Q5RHP9 1530 aa30.88■■■□□ 2.53
NUCB1-212ENST00000492367 PRXQ9BXM0 1461 aa30.87■■■□□ 2.53
NUCB1-212ENST00000492367 CUL7Q14999 1698 aa30.87■■■□□ 2.53
NUCB1-212ENST00000492367 PBRM1Q86U86 1689 aa30.84■■■□□ 2.53
NUCB1-212ENST00000492367 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
NUCB1-212ENST00000492367 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
NUCB1-212ENST00000492367 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
NUCB1-212ENST00000492367 GRIN2BQ13224 1484 aa30.77■■■□□ 2.52
NUCB1-212ENST00000492367 CARMIL1Q5VZK9 1371 aa30.76■■■□□ 2.52
NUCB1-212ENST00000492367 AQRO60306 1485 aaKnown RBP eCLIP30.76■■■□□ 2.511e-6■■■■□ 24.8
NUCB1-212ENST00000492367 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
NUCB1-212ENST00000492367 TNIKQ9UKE5 1360 aa30.71■■■□□ 2.51
NUCB1-212ENST00000492367 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
NUCB1-212ENST00000492367 ADAMTS12P58397 1594 aa30.63■■■□□ 2.49
NUCB1-212ENST00000492367 FHAD1B1AJZ9 1412 aa30.6■■■□□ 2.49
NUCB1-212ENST00000492367 MAGI1Q96QZ7 1491 aaPredicted RBP30.58■■■□□ 2.49
NUCB1-212ENST00000492367 SNAPC4Q5SXM2 1469 aa30.55■■■□□ 2.48
NUCB1-212ENST00000492367 CEP162Q5TB80 1403 aa30.48■■■□□ 2.47
NUCB1-212ENST00000492367 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
NUCB1-212ENST00000492367 SYNJ2O15056 1496 aa30.43■■■□□ 2.46
NUCB1-212ENST00000492367 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
NUCB1-212ENST00000492367 CLIP1P30622 1438 aa30.36■■■□□ 2.45
NUCB1-212ENST00000492367 CHMP7Q8WUX9 453 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms