RNA–Protein interactions for RNA: ENST00000484700.1

GYPC-206, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 5

Gene GYPC, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-206ENST00000484700 NISCHQ9Y2I1 1504 aa44.69■■■■■ 4.74
GYPC-206ENST00000484700 CCDC180Q9P1Z9 1646 aa39.99■■■■□ 3.99
GYPC-206ENST00000484700 ABCC9O60706 1549 aa39.8■■■■□ 3.96
GYPC-206ENST00000484700 RB1CC1Q8TDY2 1594 aa38.01■■■■□ 3.67
GYPC-206ENST00000484700 NACADO15069 1562 aa37.8■■■■□ 3.64
GYPC-206ENST00000484700 DCAF8L2P0C7V8 631 aa37.75■■■■□ 3.63
GYPC-206ENST00000484700 MYO15BQ96JP2 1530 aa37.35■■■■□ 3.57
GYPC-206ENST00000484700 PABPN1Q86U42 306 aaKnown RBP eCLIP37.12■■■■□ 3.53
GYPC-206ENST00000484700 DNAJC5BQ9UF47 199 aa37.08■■■■□ 3.53
GYPC-206ENST00000484700 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.52
GYPC-206ENST00000484700 UNC13AQ9UPW8 1703 aa37■■■■□ 3.51
GYPC-206ENST00000484700 DCAF1Q9Y4B6 1507 aa36.94■■■■□ 3.5
GYPC-206ENST00000484700 BICRAQ9NZM4 1560 aa36.78■■■■□ 3.48
GYPC-206ENST00000484700 SCRIBQ14160 1630 aa36.45■■■■□ 3.42
GYPC-206ENST00000484700 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
GYPC-206ENST00000484700 CC2D2AQ9P2K1 1620 aa35.93■■■■□ 3.34
GYPC-206ENST00000484700 EIF4G1Q04637 1599 aaKnown RBP35.92■■■■□ 3.34
GYPC-206ENST00000484700 CECR2Q9BXF3 1484 aa35.85■■■■□ 3.33
GYPC-206ENST00000484700 NCAPD3P42695 1498 aa34.89■■■■□ 3.18
GYPC-206ENST00000484700 ATAD2BQ9ULI0 1458 aa34.79■■■■□ 3.16
GYPC-206ENST00000484700 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
GYPC-206ENST00000484700 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
GYPC-206ENST00000484700 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.15
GYPC-206ENST00000484700 HMGXB3Q12766 1538 aa34.62■■■■□ 3.13
GYPC-206ENST00000484700 BAZ1BQ9UIG0 1483 aaKnown RBP34.51■■■■□ 3.11
GYPC-206ENST00000484700 PEG3Q9GZU2 1588 aa34.45■■■■□ 3.1
GYPC-206ENST00000484700 ERCC6Q03468 1493 aa34.41■■■■□ 3.1
GYPC-206ENST00000484700 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
GYPC-206ENST00000484700 CUX2O14529 1486 aa34.23■■■■□ 3.07
GYPC-206ENST00000484700 NESP48681 1621 aa34.21■■■■□ 3.07
GYPC-206ENST00000484700 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
GYPC-206ENST00000484700 WIZO95785 1651 aa33.99■■■■□ 3.03
GYPC-206ENST00000484700 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
GYPC-206ENST00000484700 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
GYPC-206ENST00000484700 CADPSQ9ULU8 1353 aa33.86■■■■□ 3.01
GYPC-206ENST00000484700 RSF1Q96T23 1441 aaPredicted RBP33.81■■■■□ 3
GYPC-206ENST00000484700 THOC2Q8NI27 1593 aaKnown RBP33.79■■■■□ 3
GYPC-206ENST00000484700 KIF21AQ7Z4S6 1674 aa33.74■■■□□ 2.99
GYPC-206ENST00000484700 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
GYPC-206ENST00000484700 MRC2Q9UBG0 1479 aa33.56■■■□□ 2.96
GYPC-206ENST00000484700 CFTRP13569 1480 aa33.5■■■□□ 2.95
GYPC-206ENST00000484700 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
GYPC-206ENST00000484700 FANCD2Q9BXW9 1451 aa33.46■■■□□ 2.95
GYPC-206ENST00000484700 WDR62O43379 1518 aa33.43■■■□□ 2.94
GYPC-206ENST00000484700 CCDC88BA6NC98 1476 aa33.25■■■□□ 2.91
GYPC-206ENST00000484700 URB2Q14146 1524 aaKnown RBP33.12■■■□□ 2.89
GYPC-206ENST00000484700 PRDM2Q13029 1718 aa33.11■■■□□ 2.89
GYPC-206ENST00000484700 ABCC8Q09428 1581 aa32.86■■■□□ 2.85
GYPC-206ENST00000484700 TOPBP1Q92547 1522 aa32.83■■■□□ 2.85
GYPC-206ENST00000484700 IFT140Q96RY7 1462 aa32.82■■■□□ 2.84
GYPC-206ENST00000484700 OSCARQ8IYS5 282 aa32.78■■■□□ 2.84
GYPC-206ENST00000484700 DNMBPQ6XZF7 1577 aa32.73■■■□□ 2.83
GYPC-206ENST00000484700 ZNF608Q9ULD9 1512 aaPredicted RBP32.67■■■□□ 2.82
GYPC-206ENST00000484700 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
GYPC-206ENST00000484700 SUPT5HO00267 1087 aaKnown RBP32.57■■■□□ 2.8
GYPC-206ENST00000484700 EIF4G3O43432 1585 aaKnown RBP32.5■■■□□ 2.79
GYPC-206ENST00000484700 POLA1P09884 1462 aaPredicted RBP32.5■■■□□ 2.79
GYPC-206ENST00000484700 TARBP1Q13395 1621 aaKnown RBP32.48■■■□□ 2.79
GYPC-206ENST00000484700 AQRO60306 1485 aaKnown RBP eCLIP32.44■■■□□ 2.783e-7■■■□□ 15.4
GYPC-206ENST00000484700 SOGA1O94964 1423 aa32.42■■■□□ 2.78
GYPC-206ENST00000484700 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
GYPC-206ENST00000484700 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
GYPC-206ENST00000484700 CUX1P39880 1505 aa32.32■■■□□ 2.76
GYPC-206ENST00000484700 TDRD9Q8NDG6 1382 aaKnown RBP32.31■■■□□ 2.76
GYPC-206ENST00000484700 FBLN2P98095 1184 aa32.29■■■□□ 2.76
GYPC-206ENST00000484700 WDR97A6NE52 1622 aa32.23■■■□□ 2.75
GYPC-206ENST00000484700 RIMBP3CA6NJZ7 1639 aa32.2■■■□□ 2.75
GYPC-206ENST00000484700 RIMBP3BA6NNM3 1639 aa32.2■■■□□ 2.75
GYPC-206ENST00000484700 RIMBP3Q9UFD9 1639 aa32.2■■■□□ 2.75
GYPC-206ENST00000484700 CHD1O14646 1710 aa32.2■■■□□ 2.74
GYPC-206ENST00000484700 ARHGEF11O15085 1522 aa32.15■■■□□ 2.74
GYPC-206ENST00000484700 SNAPC4Q5SXM2 1469 aa32.12■■■□□ 2.73
GYPC-206ENST00000484700 GRIN2BQ13224 1484 aa32.1■■■□□ 2.73
GYPC-206ENST00000484700 CHMP7Q8WUX9 453 aaPredicted RBP32.09■■■□□ 2.73
GYPC-206ENST00000484700 MAGI1Q96QZ7 1491 aaPredicted RBP32.08■■■□□ 2.73
GYPC-206ENST00000484700 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.71
GYPC-206ENST00000484700 ABCA10Q8WWZ4 1543 aa32■■■□□ 2.71
GYPC-206ENST00000484700 CYB5RLQ6IPT4 315 aa31.98■■■□□ 2.71
GYPC-206ENST00000484700 WRNQ14191 1432 aaPredicted RBP eCLIP31.97■■■□□ 2.71
GYPC-206ENST00000484700 SYNJ2O15056 1496 aa31.96■■■□□ 2.71
GYPC-206ENST00000484700 SYNJ1O43426 1573 aa31.93■■■□□ 2.7
GYPC-206ENST00000484700 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
GYPC-206ENST00000484700 TOP2BQ02880 1626 aa31.88■■■□□ 2.69
GYPC-206ENST00000484700 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
GYPC-206ENST00000484700 BIVM-ERCC5R4GMW8 1640 aa31.86■■■□□ 2.69
GYPC-206ENST00000484700 CLASP1Q7Z460 1538 aa31.85■■■□□ 2.69
GYPC-206ENST00000484700 ARAP1Q96P48 1450 aa31.83■■■□□ 2.69
GYPC-206ENST00000484700 GRIN2AQ12879 1464 aa31.66■■■□□ 2.66
GYPC-206ENST00000484700 ADAMTS12P58397 1594 aa31.64■■■□□ 2.65
GYPC-206ENST00000484700 FHAD1B1AJZ9 1412 aa31.63■■■□□ 2.65
GYPC-206ENST00000484700 ERICH3Q5RHP9 1530 aa31.61■■■□□ 2.65
GYPC-206ENST00000484700 TRHP20396 242 aaPredicted RBP31.59■■■□□ 2.65
GYPC-206ENST00000484700 NUP160Q12769 1436 aa31.53■■■□□ 2.64
GYPC-206ENST00000484700 CEP170Q5SW79 1584 aa31.49■■■□□ 2.63
GYPC-206ENST00000484700 KIF27Q86VH2 1401 aa31.35■■■□□ 2.61
GYPC-206ENST00000484700 ERCC6L2Q5T890 1561 aa31.34■■■□□ 2.61
GYPC-206ENST00000484700 SHROOM2Q13796 1616 aa31.33■■■□□ 2.61
GYPC-206ENST00000484700 JPH4Q96JJ6 628 aa31.29■■■□□ 2.6
GYPC-206ENST00000484700 IGF1RP08069 1367 aa31.27■■■□□ 2.6
GYPC-206ENST00000484700 PRG4Q92954 1404 aaPredicted RBP31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms