Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 AC073195.1-201ENST00000607241 877 ntBASIC18.85■□□□□ 0.61
LRRC39Q96DD0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 AC135776.1-201ENST00000319817 2481 ntBASIC18.85■□□□□ 0.61
LRRC39Q96DD0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 AC093677.2-201ENST00000600169 1863 ntBASIC18.84■□□□□ 0.61
LRRC39Q96DD0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 AC008040.2-201ENST00000461049 708 ntBASIC18.84■□□□□ 0.61
LRRC39Q96DD0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 CR392000.1-201ENST00000624770 1228 ntBASIC18.84■□□□□ 0.61
LRRC39Q96DD0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.84■□□□□ 0.61
LRRC39Q96DD0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC39Q96DD0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.83■□□□□ 0.6
LRRC39Q96DD0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 AF186192.3-201ENST00000583427 947 ntBASIC18.83■□□□□ 0.6
LRRC39Q96DD0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 AC008764.6-201ENST00000595909 2069 ntBASIC18.83■□□□□ 0.6
LRRC39Q96DD0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC39Q96DD0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 AP000593.1-201ENST00000393668 712 ntBASIC18.82■□□□□ 0.6
LRRC39Q96DD0 AC128676.1-201ENST00000454392 318 ntBASIC18.82■□□□□ 0.6
LRRC39Q96DD0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC39Q96DD0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms