RNA–Protein interactions for RNA: ENST00000589634.1

SMAD7-207, Transcript of SMAD family member 7, humanhuman

APPRIS ALT1 TSL 4 BASIC

Gene SMAD7, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-207ENST00000589634 NISCHQ9Y2I1 1504 aa46.79■■■■■ 5.08
SMAD7-207ENST00000589634 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
SMAD7-207ENST00000589634 ABCC9O60706 1549 aa40.88■■■■■ 4.13
SMAD7-207ENST00000589634 DCAF8L2P0C7V8 631 aa39.42■■■■□ 3.9
SMAD7-207ENST00000589634 RB1CC1Q8TDY2 1594 aa39.26■■■■□ 3.88
SMAD7-207ENST00000589634 NACADO15069 1562 aa39.19■■■■□ 3.86
SMAD7-207ENST00000589634 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
SMAD7-207ENST00000589634 MYO15BQ96JP2 1530 aa38.9■■■■□ 3.82
SMAD7-207ENST00000589634 DCAF1Q9Y4B6 1507 aa38.69■■■■□ 3.78
SMAD7-207ENST00000589634 PABPN1Q86U42 306 aaKnown RBP eCLIP38.27■■■■□ 3.72
SMAD7-207ENST00000589634 UNC13AQ9UPW8 1703 aa38.09■■■■□ 3.69
SMAD7-207ENST00000589634 SCRIBQ14160 1630 aa37.96■■■■□ 3.67
SMAD7-207ENST00000589634 BICRAQ9NZM4 1560 aa37.93■■■■□ 3.66
SMAD7-207ENST00000589634 SHROOM4Q9ULL8 1493 aa37.66■■■■□ 3.62
SMAD7-207ENST00000589634 DNAJC5BQ9UF47 199 aa37.56■■■■□ 3.6
SMAD7-207ENST00000589634 EIF4G1Q04637 1599 aaKnown RBP37.03■■■■□ 3.52
SMAD7-207ENST00000589634 CC2D2AQ9P2K1 1620 aa36.88■■■■□ 3.5
SMAD7-207ENST00000589634 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
SMAD7-207ENST00000589634 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
SMAD7-207ENST00000589634 SMARCA4P51532 1647 aa36.27■■■■□ 3.4
SMAD7-207ENST00000589634 NCAPD3P42695 1498 aa36.18■■■■□ 3.38
SMAD7-207ENST00000589634 ATAD2BQ9ULI0 1458 aa36.17■■■■□ 3.38
SMAD7-207ENST00000589634 SMARCA2P51531 1590 aa36.15■■■■□ 3.38
SMAD7-207ENST00000589634 MROH2BQ7Z745 1585 aa36.03■■■■□ 3.36
SMAD7-207ENST00000589634 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
SMAD7-207ENST00000589634 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
SMAD7-207ENST00000589634 PEG3Q9GZU2 1588 aa35.9■■■■□ 3.34
SMAD7-207ENST00000589634 RSF1Q96T23 1441 aaPredicted RBP35.66■■■■□ 3.3
SMAD7-207ENST00000589634 WIZO95785 1651 aa35.59■■■■□ 3.29
SMAD7-207ENST00000589634 ERCC6Q03468 1493 aa35.33■■■■□ 3.25
SMAD7-207ENST00000589634 NESP48681 1621 aa35.28■■■■□ 3.24
SMAD7-207ENST00000589634 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
SMAD7-207ENST00000589634 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
SMAD7-207ENST00000589634 CADPSQ9ULU8 1353 aa35.18■■■■□ 3.22
SMAD7-207ENST00000589634 PDS5BQ9NTI5 1447 aa35.1■■■■□ 3.21
SMAD7-207ENST00000589634 CCDC88BA6NC98 1476 aa34.9■■■■□ 3.18
SMAD7-207ENST00000589634 CUX2O14529 1486 aa34.9■■■■□ 3.18
SMAD7-207ENST00000589634 CFTRP13569 1480 aa34.89■■■■□ 3.18
SMAD7-207ENST00000589634 SUPT5HO00267 1087 aaKnown RBP34.87■■■■□ 3.17
SMAD7-207ENST00000589634 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.15
SMAD7-207ENST00000589634 FANCD2Q9BXW9 1451 aa34.74■■■■□ 3.15
SMAD7-207ENST00000589634 CEP164Q9UPV0 1460 aa34.71■■■■□ 3.15
SMAD7-207ENST00000589634 THOC2Q8NI27 1593 aaKnown RBP34.68■■■■□ 3.14
SMAD7-207ENST00000589634 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
SMAD7-207ENST00000589634 WDR62O43379 1518 aa34.48■■■■□ 3.11
SMAD7-207ENST00000589634 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
SMAD7-207ENST00000589634 URB2Q14146 1524 aaKnown RBP34.32■■■■□ 3.08
SMAD7-207ENST00000589634 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
SMAD7-207ENST00000589634 TOPBP1Q92547 1522 aa34.13■■■■□ 3.05
SMAD7-207ENST00000589634 DNMBPQ6XZF7 1577 aa34.07■■■■□ 3.05
SMAD7-207ENST00000589634 IFT140Q96RY7 1462 aa34.01■■■■□ 3.03
SMAD7-207ENST00000589634 DNAJC5Q9H3Z4 198 aa33.99■■■■□ 3.03
SMAD7-207ENST00000589634 POLA1P09884 1462 aaPredicted RBP33.83■■■■□ 3.01
SMAD7-207ENST00000589634 CUX1P39880 1505 aa33.81■■■■□ 3
SMAD7-207ENST00000589634 SOGA1O94964 1423 aa33.8■■■■□ 3
SMAD7-207ENST00000589634 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
SMAD7-207ENST00000589634 FGD5Q6ZNL6 1462 aa33.76■■■■□ 3
SMAD7-207ENST00000589634 RAD54L2Q9Y4B4 1467 aa33.7■■■□□ 2.99
SMAD7-207ENST00000589634 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
SMAD7-207ENST00000589634 WRNQ14191 1432 aaPredicted RBP eCLIP33.68■■■□□ 2.98
SMAD7-207ENST00000589634 AQRO60306 1485 aaKnown RBP eCLIP33.64■■■□□ 2.98
SMAD7-207ENST00000589634 TDRD9Q8NDG6 1382 aaKnown RBP33.61■■■□□ 2.97
SMAD7-207ENST00000589634 EIF4G3O43432 1585 aaKnown RBP33.6■■■□□ 2.97
SMAD7-207ENST00000589634 OSCARQ8IYS5 282 aa33.59■■■□□ 2.97
SMAD7-207ENST00000589634 TOP2BQ02880 1626 aa33.5■■■□□ 2.95
SMAD7-207ENST00000589634 WDR97A6NE52 1622 aa33.47■■■□□ 2.95
SMAD7-207ENST00000589634 SYNJ1O43426 1573 aa33.45■■■□□ 2.95
SMAD7-207ENST00000589634 BIVM-ERCC5R4GMW8 1640 aa33.44■■■□□ 2.94
SMAD7-207ENST00000589634 FBLN2P98095 1184 aa33.43■■■□□ 2.94
SMAD7-207ENST00000589634 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
SMAD7-207ENST00000589634 GRIN2BQ13224 1484 aa33.38■■■□□ 2.93
SMAD7-207ENST00000589634 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
SMAD7-207ENST00000589634 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
SMAD7-207ENST00000589634 SNAPC4Q5SXM2 1469 aa33.31■■■□□ 2.92
SMAD7-207ENST00000589634 MAGI1Q96QZ7 1491 aaPredicted RBP33.28■■■□□ 2.92
SMAD7-207ENST00000589634 ABCA5Q8WWZ7 1642 aa33.2■■■□□ 2.9
SMAD7-207ENST00000589634 SYNJ2O15056 1496 aa33.16■■■□□ 2.9
SMAD7-207ENST00000589634 CHD1O14646 1710 aa33.12■■■□□ 2.89
SMAD7-207ENST00000589634 PBRM1Q86U86 1689 aa33.12■■■□□ 2.89
SMAD7-207ENST00000589634 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
SMAD7-207ENST00000589634 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
SMAD7-207ENST00000589634 FHAD1B1AJZ9 1412 aa33■■■□□ 2.87
SMAD7-207ENST00000589634 TRIM41Q8WV44 630 aa32.98■■■□□ 2.87
SMAD7-207ENST00000589634 ADAMTS12P58397 1594 aa32.92■■■□□ 2.86
SMAD7-207ENST00000589634 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
SMAD7-207ENST00000589634 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
SMAD7-207ENST00000589634 IGF1RP08069 1367 aa32.85■■■□□ 2.85
SMAD7-207ENST00000589634 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.85
SMAD7-207ENST00000589634 RIMBP3CA6NJZ7 1639 aa32.81■■■□□ 2.84
SMAD7-207ENST00000589634 RIMBP3BA6NNM3 1639 aa32.81■■■□□ 2.84
SMAD7-207ENST00000589634 RIMBP3Q9UFD9 1639 aa32.81■■■□□ 2.84
SMAD7-207ENST00000589634 NUP160Q12769 1436 aa32.75■■■□□ 2.83
SMAD7-207ENST00000589634 CYB5RLQ6IPT4 315 aa32.73■■■□□ 2.83
SMAD7-207ENST00000589634 CARMIL1Q5VZK9 1371 aa32.7■■■□□ 2.82
SMAD7-207ENST00000589634 CUL7Q14999 1698 aa32.68■■■□□ 2.82
SMAD7-207ENST00000589634 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
SMAD7-207ENST00000589634 ARAP1Q96P48 1450 aa32.57■■■□□ 2.8
SMAD7-207ENST00000589634 JPH4Q96JJ6 628 aa32.56■■■□□ 2.8
SMAD7-207ENST00000589634 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
SMAD7-207ENST00000589634 KIAA0586Q9BVV6 1533 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms