Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.73e-6■■□□□ 11.4
SND1Q7KZF4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.533e-6■■□□□ 11.4
SND1Q7KZF4 LTBP4-229ENST00000601032 2019 ntTSL 1 (best)18.35■□□□□ 0.533e-6■■□□□ 11.4
SND1Q7KZF4 LTBP4-202ENST00000243562 3140 ntTSL 215.77■□□□□ 0.123e-6■■□□□ 11.4
SND1Q7KZF4 YIPF5-206ENST00000522203 653 ntTSL 510.21□□□□□ -0.775e-6■■□□□ 11.4
SND1Q7KZF4 YIPF5-203ENST00000508754 793 ntTSL 25.46□□□□□ -1.545e-6■■□□□ 11.4
SND1Q7KZF4 TM9SF4-203ENST00000417389 553 ntTSL 411.5□□□□□ -0.573e-9■■□□□ 11.4
SND1Q7KZF4 ATP5A1-213ENST00000590406 756 ntTSL 320.06■□□□□ 0.83e-8■■□□□ 11.4
SND1Q7KZF4 ATP5A1-209ENST00000589611 995 ntTSL 29.92□□□□□ -0.823e-8■■□□□ 11.4
SND1Q7KZF4 LDHA-213ENST00000535451 465 ntTSL 412.67□□□□□ -0.383e-28■■□□□ 11.4
SND1Q7KZF4 ATP1A1-202ENST00000369494 698 ntTSL 39.37□□□□□ -0.912e-8■■□□□ 11.4
SND1Q7KZF4 LMNA-225ENST00000515824 393 ntTSL 220.09■□□□□ 0.815e-10■■□□□ 11.4
SND1Q7KZF4 ACSM3-202ENST00000440284 1517 ntTSL 1 (best) BASIC11□□□□□ -0.653e-7■■□□□ 11.4
SND1Q7KZF4 ACSM3-207ENST00000562251 1931 ntTSL 27.84□□□□□ -1.163e-7■■□□□ 11.4
SND1Q7KZF4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.573e-7■■□□□ 11.4
SND1Q7KZF4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.72■■□□□ 1.553e-16■■□□□ 11.4
SND1Q7KZF4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 19e-9■■□□□ 11.4
SND1Q7KZF4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.87■□□□□ 0.933e-8■■□□□ 11.4
SND1Q7KZF4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.859e-9■■□□□ 11.4
SND1Q7KZF4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.55■□□□□ 0.723e-16■■□□□ 11.4
SND1Q7KZF4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.143e-16■■□□□ 11.4
SND1Q7KZF4 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.133e-16■■□□□ 11.4
SND1Q7KZF4 SDF4-203ENST00000403997 728 ntTSL 313.74□□□□□ -0.211e-7■■□□□ 11.4
SND1Q7KZF4 CAPNS1-208ENST00000589162 701 ntTSL 36.23□□□□□ -1.411e-6■■□□□ 11.4
SND1Q7KZF4 COL9A3-208ENST00000469802 680 ntTSL 216.75■□□□□ 0.273e-26■■□□□ 11.4
SND1Q7KZF4 CYP27A1-202ENST00000411688 799 ntTSL 310.6□□□□□ -0.711e-11■■□□□ 11.4
SND1Q7KZF4 TAPBP-239ENST00000476333 726 ntTSL 216.56■□□□□ 0.241e-8■■□□□ 11.4
SND1Q7KZF4 COPA-204ENST00000481522 578 ntTSL 26.54□□□□□ -1.362e-7■■□□□ 11.4
SND1Q7KZF4 CANX-213ENST00000507307 582 ntTSL 519.91■□□□□ 0.782e-15■■□□□ 11.4
SND1Q7KZF4 LDHA-211ENST00000494573 1154 ntTSL 212.11□□□□□ -0.472e-28■■□□□ 11.4
SND1Q7KZF4 GHDC-211ENST00000590520 585 ntTSL 315.64■□□□□ 0.093e-6■■□□□ 11.4
SND1Q7KZF4 PLP2-201ENST00000376322 620 ntTSL 2 BASIC12.75□□□□□ -0.374e-8■■□□□ 11.4
SND1Q7KZF4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.153e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.883e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.413e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.26■□□□□ 0.353e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.44■□□□□ 0.223e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.193e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.193e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.113e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-208ENST00000562679 906 ntTSL 514.93□□□□□ -0.023e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-211ENST00000564521 2534 ntTSL 514.86□□□□□ -0.033e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.083e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.093e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.26□□□□□ -0.133e-34■■□□□ 11.4
SND1Q7KZF4 ALDOA-214ENST00000564688 613 ntTSL 512□□□□□ -0.493e-34■■□□□ 11.4
SND1Q7KZF4 ATP13A1-207ENST00000473243 4729 ntTSL 216.12■□□□□ 0.177e-7■■□□□ 11.4
SND1Q7KZF4 HP-205ENST00000561927 822 ntTSL 211.69□□□□□ -0.541e-10■■□□□ 11.4
SND1Q7KZF4 SPCS3-202ENST00000507001 478 ntTSL 28.53□□□□□ -1.044e-12■■□□□ 11.4
SND1Q7KZF4 CRELD2-210ENST00000487969 2622 ntTSL 217.4■□□□□ 0.382e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.262e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.212e-7■■□□□ 11.4
SND1Q7KZF4 SLC12A7-204ENST00000513223 1066 ntTSL 516.28■□□□□ 0.25e-6■■□□□ 11.4
SND1Q7KZF4 MTTP-211ENST00000515141 608 ntTSL 415.91■□□□□ 0.142e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.112e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.032e-7■■□□□ 11.4
SND1Q7KZF4 MTTP-205ENST00000505094 554 ntTSL 413.86□□□□□ -0.192e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.322e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-215ENST00000490140 680 ntTSL 212.2□□□□□ -0.462e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-217ENST00000492244 673 ntTSL 312.2□□□□□ -0.462e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC12.17□□□□□ -0.462e-7■■□□□ 11.4
SND1Q7KZF4 MTTP-210ENST00000513404 564 ntTSL 412.16□□□□□ -0.462e-7■■□□□ 11.4
SND1Q7KZF4 PGD-208ENST00000493288 476 ntTSL 311.95□□□□□ -0.52e-7■■□□□ 11.4
SND1Q7KZF4 MTTP-202ENST00000422897 1155 ntTSL 1 (best) BASIC10.69□□□□□ -0.72e-7■■□□□ 11.4
SND1Q7KZF4 FDPS-214ENST00000489324 475 ntTSL 210.18□□□□□ -0.782e-7■■□□□ 11.4
SND1Q7KZF4 TMEM2-209ENST00000538669 3509 ntTSL 1 (best)6.96□□□□□ -1.35e-6■■□□□ 11.4
SND1Q7KZF4 MTTP-207ENST00000506883 549 ntTSL 36.24□□□□□ -1.412e-7■■□□□ 11.4
SND1Q7KZF4 MTTP-206ENST00000505142 537 ntTSL 45.71□□□□□ -1.52e-7■■□□□ 11.4
SND1Q7KZF4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.391e-13■□□□□ 11.3
SND1Q7KZF4 SPON2-211ENST00000507466 525 ntTSL 223.66■■□□□ 1.381e-13■□□□□ 11.3
SND1Q7KZF4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.051e-13■□□□□ 11.3
SND1Q7KZF4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.81e-13■□□□□ 11.3
SND1Q7KZF4 SPTAN1-220ENST00000630147 785 ntTSL 210.88□□□□□ -0.675e-8■□□□□ 11.3
SND1Q7KZF4 SUN2-211ENST00000455125 872 ntTSL 213.77□□□□□ -0.211e-6■□□□□ 11.3
SND1Q7KZF4 TUBA1C-208ENST00000552125 575 ntTSL 411.08□□□□□ -0.641e-23■□□□□ 11.3
SND1Q7KZF4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.292e-7■□□□□ 11.3
SND1Q7KZF4 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.62e-7■□□□□ 11.3
SND1Q7KZF4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.29□□□□□ -1.722e-7■□□□□ 11.3
SND1Q7KZF4 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.335e-8■□□□□ 11.3
SND1Q7KZF4 PNP-207ENST00000556754 2573 ntTSL 211.67□□□□□ -0.545e-8■□□□□ 11.3
SND1Q7KZF4 PNP-204ENST00000554056 1635 ntTSL 511.31□□□□□ -0.65e-8■□□□□ 11.3
SND1Q7KZF4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.66■■□□□ 1.78e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-216ENST00000635460 706 ntTSL 524.99■■□□□ 1.598e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.61■■□□□ 1.538e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.438e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-215ENST00000635285 2046 ntTSL 523.72■■□□□ 1.398e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.11■■□□□ 1.298e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.09■■□□□ 1.138e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.69■□□□□ 0.748e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-218ENST00000635628 2812 ntTSL 419.28■□□□□ 0.688e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-206ENST00000413561 1857 ntTSL 218.75■□□□□ 0.598e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.318e-7■□□□□ 11.3
SND1Q7KZF4 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC13.4□□□□□ -0.268e-7■□□□□ 11.3
SND1Q7KZF4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.452e-6■□□□□ 11.3
SND1Q7KZF4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.63■□□□□ 0.252e-6■□□□□ 11.3
SND1Q7KZF4 SLC38A3-209ENST00000621714 992 ntTSL 515.75■□□□□ 0.112e-7■□□□□ 11.3
SND1Q7KZF4 HSPG2-209ENST00000480900 500 ntTSL 517.56■□□□□ 0.44e-6■□□□□ 11.3
SND1Q7KZF4 EIF3D-210ENST00000462794 764 ntTSL 27.07□□□□□ -1.282e-10■□□□□ 11.3
SND1Q7KZF4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.11■■□□□ 1.451e-7■□□□□ 11.3
SND1Q7KZF4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.551e-7■□□□□ 11.3
Retrieved 100 of 13,567 protein–RNA pairs in 66.4 ms