RNA–Protein interactions for RNA: ENST00000493288.1

PGD-208, Transcript of phosphogluconate dehydrogenase, humanhuman

TSL 3

Gene PGD, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-208ENST00000493288 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.81
PGD-208ENST00000493288 CCDC180Q9P1Z9 1646 aa23.07■■□□□ 1.28
PGD-208ENST00000493288 ABCC9O60706 1549 aa22.1■■□□□ 1.13
PGD-208ENST00000493288 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
PGD-208ENST00000493288 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
PGD-208ENST00000493288 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
PGD-208ENST00000493288 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
PGD-208ENST00000493288 NACADO15069 1562 aa21.61■■□□□ 1.05
PGD-208ENST00000493288 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
PGD-208ENST00000493288 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
PGD-208ENST00000493288 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
PGD-208ENST00000493288 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
PGD-208ENST00000493288 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
PGD-208ENST00000493288 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
PGD-208ENST00000493288 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
PGD-208ENST00000493288 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
PGD-208ENST00000493288 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
PGD-208ENST00000493288 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
PGD-208ENST00000493288 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
PGD-208ENST00000493288 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
PGD-208ENST00000493288 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
PGD-208ENST00000493288 WIZO95785 1651 aa20.09■□□□□ 0.81
PGD-208ENST00000493288 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
PGD-208ENST00000493288 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
PGD-208ENST00000493288 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
PGD-208ENST00000493288 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
PGD-208ENST00000493288 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
PGD-208ENST00000493288 BAZ1BQ9UIG0 1483 aaKnown RBP19.94■□□□□ 0.78
PGD-208ENST00000493288 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
PGD-208ENST00000493288 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
PGD-208ENST00000493288 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
PGD-208ENST00000493288 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
PGD-208ENST00000493288 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
PGD-208ENST00000493288 CFTRP13569 1480 aa19.41■□□□□ 0.7
PGD-208ENST00000493288 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
PGD-208ENST00000493288 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
PGD-208ENST00000493288 NESP48681 1621 aa19.27■□□□□ 0.68
PGD-208ENST00000493288 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
PGD-208ENST00000493288 PDS5BQ9NTI5 1447 aa19.23■□□□□ 0.67
PGD-208ENST00000493288 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
PGD-208ENST00000493288 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
PGD-208ENST00000493288 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
PGD-208ENST00000493288 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
PGD-208ENST00000493288 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
PGD-208ENST00000493288 ERCC6Q03468 1493 aa19.04■□□□□ 0.64
PGD-208ENST00000493288 SYNJ1O43426 1573 aa19.02■□□□□ 0.63
PGD-208ENST00000493288 CUX1P39880 1505 aa19■□□□□ 0.63
PGD-208ENST00000493288 TOP2BQ02880 1626 aa19■□□□□ 0.63
PGD-208ENST00000493288 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
PGD-208ENST00000493288 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
PGD-208ENST00000493288 DNMBPQ6XZF7 1577 aa18.95■□□□□ 0.62
PGD-208ENST00000493288 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
PGD-208ENST00000493288 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
PGD-208ENST00000493288 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
PGD-208ENST00000493288 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
PGD-208ENST00000493288 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
PGD-208ENST00000493288 WDR62O43379 1518 aa18.82■□□□□ 0.6
PGD-208ENST00000493288 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
PGD-208ENST00000493288 SOGA1O94964 1423 aa18.81■□□□□ 0.6
PGD-208ENST00000493288 EEA1Q15075 1411 aa18.8■□□□□ 0.6
PGD-208ENST00000493288 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
PGD-208ENST00000493288 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
PGD-208ENST00000493288 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
PGD-208ENST00000493288 CUX2O14529 1486 aa18.72■□□□□ 0.59
PGD-208ENST00000493288 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
PGD-208ENST00000493288 RUSC2Q8N2Y8 1516 aa18.7■□□□□ 0.58
PGD-208ENST00000493288 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
PGD-208ENST00000493288 AEBP2Q6ZN18 517 aaPredicted RBP18.7■□□□□ 0.58
PGD-208ENST00000493288 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
PGD-208ENST00000493288 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
PGD-208ENST00000493288 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
PGD-208ENST00000493288 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
PGD-208ENST00000493288 WDR97A6NE52 1622 aa18.57■□□□□ 0.56
PGD-208ENST00000493288 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
PGD-208ENST00000493288 IGF1RP08069 1367 aa18.56■□□□□ 0.56
PGD-208ENST00000493288 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
PGD-208ENST00000493288 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.566e-6■■■■□ 23.2
PGD-208ENST00000493288 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
PGD-208ENST00000493288 ZNF608Q9ULD9 1512 aaPredicted RBP18.52■□□□□ 0.56
PGD-208ENST00000493288 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
PGD-208ENST00000493288 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
PGD-208ENST00000493288 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
PGD-208ENST00000493288 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
PGD-208ENST00000493288 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
PGD-208ENST00000493288 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
PGD-208ENST00000493288 KIF21BO75037 1637 aa18.47■□□□□ 0.55
PGD-208ENST00000493288 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
PGD-208ENST00000493288 RAPGEF2Q9Y4G8 1499 aa18.44■□□□□ 0.54
PGD-208ENST00000493288 CUL7Q14999 1698 aa18.43■□□□□ 0.54
PGD-208ENST00000493288 PBRM1Q86U86 1689 aa18.4■□□□□ 0.54
PGD-208ENST00000493288 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
PGD-208ENST00000493288 TNIKQ9UKE5 1360 aa18.38■□□□□ 0.53
PGD-208ENST00000493288 SNAPC4Q5SXM2 1469 aa18.37■□□□□ 0.53
PGD-208ENST00000493288 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
PGD-208ENST00000493288 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.52
PGD-208ENST00000493288 ADAMTS12P58397 1594 aa18.33■□□□□ 0.52
PGD-208ENST00000493288 FBLN2P98095 1184 aa18.3■□□□□ 0.52
PGD-208ENST00000493288 SYNJ2O15056 1496 aa18.28■□□□□ 0.52
PGD-208ENST00000493288 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
PGD-208ENST00000493288 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms