RNA–Protein interactions for RNA: ENST00000552125.1

TUBA1C-208, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-208ENST00000552125 NISCHQ9Y2I1 1504 aa26.93■■□□□ 1.9
TUBA1C-208ENST00000552125 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
TUBA1C-208ENST00000552125 ABCC9O60706 1549 aa23.75■■□□□ 1.39
TUBA1C-208ENST00000552125 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
TUBA1C-208ENST00000552125 NACADO15069 1562 aa22.8■■□□□ 1.24
TUBA1C-208ENST00000552125 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
TUBA1C-208ENST00000552125 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
TUBA1C-208ENST00000552125 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.17
TUBA1C-208ENST00000552125 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
TUBA1C-208ENST00000552125 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
TUBA1C-208ENST00000552125 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
TUBA1C-208ENST00000552125 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
TUBA1C-208ENST00000552125 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
TUBA1C-208ENST00000552125 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
TUBA1C-208ENST00000552125 SCRIBQ14160 1630 aa21.83■■□□□ 1.08
TUBA1C-208ENST00000552125 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
TUBA1C-208ENST00000552125 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
TUBA1C-208ENST00000552125 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.03
TUBA1C-208ENST00000552125 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
TUBA1C-208ENST00000552125 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
TUBA1C-208ENST00000552125 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
TUBA1C-208ENST00000552125 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
TUBA1C-208ENST00000552125 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
TUBA1C-208ENST00000552125 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
TUBA1C-208ENST00000552125 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
TUBA1C-208ENST00000552125 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
TUBA1C-208ENST00000552125 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
TUBA1C-208ENST00000552125 CUX2O14529 1486 aa20.58■□□□□ 0.89
TUBA1C-208ENST00000552125 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
TUBA1C-208ENST00000552125 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
TUBA1C-208ENST00000552125 NESP48681 1621 aa20.46■□□□□ 0.87
TUBA1C-208ENST00000552125 WIZO95785 1651 aa20.41■□□□□ 0.86
TUBA1C-208ENST00000552125 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
TUBA1C-208ENST00000552125 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
TUBA1C-208ENST00000552125 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
TUBA1C-208ENST00000552125 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
TUBA1C-208ENST00000552125 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.84
TUBA1C-208ENST00000552125 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.83
TUBA1C-208ENST00000552125 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
TUBA1C-208ENST00000552125 CFTRP13569 1480 aa20.18■□□□□ 0.82
TUBA1C-208ENST00000552125 MRC2Q9UBG0 1479 aa20.15■□□□□ 0.82
TUBA1C-208ENST00000552125 WDR62O43379 1518 aa20.14■□□□□ 0.81
TUBA1C-208ENST00000552125 CEP164Q9UPV0 1460 aa20.09■□□□□ 0.81
TUBA1C-208ENST00000552125 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
TUBA1C-208ENST00000552125 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
TUBA1C-208ENST00000552125 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
TUBA1C-208ENST00000552125 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
TUBA1C-208ENST00000552125 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
TUBA1C-208ENST00000552125 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
TUBA1C-208ENST00000552125 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
TUBA1C-208ENST00000552125 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
TUBA1C-208ENST00000552125 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
TUBA1C-208ENST00000552125 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
TUBA1C-208ENST00000552125 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
TUBA1C-208ENST00000552125 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
TUBA1C-208ENST00000552125 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
TUBA1C-208ENST00000552125 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
TUBA1C-208ENST00000552125 CUX1P39880 1505 aa19.43■□□□□ 0.7
TUBA1C-208ENST00000552125 SOGA1O94964 1423 aa19.42■□□□□ 0.7
TUBA1C-208ENST00000552125 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
TUBA1C-208ENST00000552125 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.78e-11■■■□□ 19.2
TUBA1C-208ENST00000552125 RAD54L2Q9Y4B4 1467 aa19.37■□□□□ 0.69
TUBA1C-208ENST00000552125 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
TUBA1C-208ENST00000552125 CHD1O14646 1710 aa19.31■□□□□ 0.68
TUBA1C-208ENST00000552125 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
TUBA1C-208ENST00000552125 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
TUBA1C-208ENST00000552125 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
TUBA1C-208ENST00000552125 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
TUBA1C-208ENST00000552125 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
TUBA1C-208ENST00000552125 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
TUBA1C-208ENST00000552125 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
TUBA1C-208ENST00000552125 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
TUBA1C-208ENST00000552125 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
TUBA1C-208ENST00000552125 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
TUBA1C-208ENST00000552125 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
TUBA1C-208ENST00000552125 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
TUBA1C-208ENST00000552125 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
TUBA1C-208ENST00000552125 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
TUBA1C-208ENST00000552125 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
TUBA1C-208ENST00000552125 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.661e-11■□□□□ 11.1
TUBA1C-208ENST00000552125 PBRM1Q86U86 1689 aa19.19■□□□□ 0.66
TUBA1C-208ENST00000552125 CLASP1Q7Z460 1538 aa19.18■□□□□ 0.66
TUBA1C-208ENST00000552125 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
TUBA1C-208ENST00000552125 FBLN2P98095 1184 aa19.12■□□□□ 0.65
TUBA1C-208ENST00000552125 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
TUBA1C-208ENST00000552125 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
TUBA1C-208ENST00000552125 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
TUBA1C-208ENST00000552125 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
TUBA1C-208ENST00000552125 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
TUBA1C-208ENST00000552125 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
TUBA1C-208ENST00000552125 NUP160Q12769 1436 aa19■□□□□ 0.63
TUBA1C-208ENST00000552125 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
TUBA1C-208ENST00000552125 CEP170Q5SW79 1584 aa18.92■□□□□ 0.62
TUBA1C-208ENST00000552125 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
TUBA1C-208ENST00000552125 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
TUBA1C-208ENST00000552125 CUL7Q14999 1698 aa18.81■□□□□ 0.6
TUBA1C-208ENST00000552125 IGF1RP08069 1367 aa18.79■□□□□ 0.6
TUBA1C-208ENST00000552125 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
TUBA1C-208ENST00000552125 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
TUBA1C-208ENST00000552125 KIAA0586Q9BVV6 1533 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms