RNA–Protein interactions for RNA: ENST00000621714.4

SLC38A3-209, Transcript of solute carrier family 38 member 3, humanhuman

TSL 5

Gene SLC38A3, Length 992 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3-209ENST00000621714 NISCHQ9Y2I1 1504 aa36.92■■■■□ 3.5
SLC38A3-209ENST00000621714 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
SLC38A3-209ENST00000621714 ABCC9O60706 1549 aa31.89■■■□□ 2.7
SLC38A3-209ENST00000621714 NACADO15069 1562 aa30.82■■■□□ 2.52
SLC38A3-209ENST00000621714 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
SLC38A3-209ENST00000621714 ZCCHC6Q5VYS8 1495 aaKnown RBP30.79■■■□□ 2.52
SLC38A3-209ENST00000621714 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
SLC38A3-209ENST00000621714 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
SLC38A3-209ENST00000621714 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
SLC38A3-209ENST00000621714 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
SLC38A3-209ENST00000621714 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
SLC38A3-209ENST00000621714 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
SLC38A3-209ENST00000621714 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.36
SLC38A3-209ENST00000621714 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
SLC38A3-209ENST00000621714 DNAJC5BQ9UF47 199 aa29.21■■■□□ 2.27
SLC38A3-209ENST00000621714 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
SLC38A3-209ENST00000621714 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
SLC38A3-209ENST00000621714 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
SLC38A3-209ENST00000621714 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
SLC38A3-209ENST00000621714 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
SLC38A3-209ENST00000621714 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
SLC38A3-209ENST00000621714 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
SLC38A3-209ENST00000621714 SMARCA2P51531 1590 aa28.42■■■□□ 2.14
SLC38A3-209ENST00000621714 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
SLC38A3-209ENST00000621714 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
SLC38A3-209ENST00000621714 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
SLC38A3-209ENST00000621714 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
SLC38A3-209ENST00000621714 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
SLC38A3-209ENST00000621714 WIZO95785 1651 aa28.08■■■□□ 2.09
SLC38A3-209ENST00000621714 TOP2AP11388 1531 aaKnown RBP27.85■■■□□ 2.05
SLC38A3-209ENST00000621714 LAMC3Q9Y6N6 1575 aa27.66■■■□□ 2.02
SLC38A3-209ENST00000621714 NESP48681 1621 aa27.63■■■□□ 2.01
SLC38A3-209ENST00000621714 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
SLC38A3-209ENST00000621714 CCDC88BA6NC98 1476 aa27.5■■□□□ 1.99
SLC38A3-209ENST00000621714 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
SLC38A3-209ENST00000621714 CFTRP13569 1480 aa27.47■■□□□ 1.99
SLC38A3-209ENST00000621714 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
SLC38A3-209ENST00000621714 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
SLC38A3-209ENST00000621714 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
SLC38A3-209ENST00000621714 CUX2O14529 1486 aa27.25■■□□□ 1.95
SLC38A3-209ENST00000621714 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
SLC38A3-209ENST00000621714 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
SLC38A3-209ENST00000621714 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
SLC38A3-209ENST00000621714 CEP164Q9UPV0 1460 aa27.2■■□□□ 1.95
SLC38A3-209ENST00000621714 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
SLC38A3-209ENST00000621714 WDR62O43379 1518 aa27.1■■□□□ 1.93
SLC38A3-209ENST00000621714 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
SLC38A3-209ENST00000621714 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
SLC38A3-209ENST00000621714 TOPBP1Q92547 1522 aa26.83■■□□□ 1.89
SLC38A3-209ENST00000621714 DNMBPQ6XZF7 1577 aa26.82■■□□□ 1.88
SLC38A3-209ENST00000621714 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
SLC38A3-209ENST00000621714 CUX1P39880 1505 aa26.65■■□□□ 1.86
SLC38A3-209ENST00000621714 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
SLC38A3-209ENST00000621714 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
SLC38A3-209ENST00000621714 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
SLC38A3-209ENST00000621714 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
SLC38A3-209ENST00000621714 SOGA1O94964 1423 aa26.49■■□□□ 1.83
SLC38A3-209ENST00000621714 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
SLC38A3-209ENST00000621714 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
SLC38A3-209ENST00000621714 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
SLC38A3-209ENST00000621714 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
SLC38A3-209ENST00000621714 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
SLC38A3-209ENST00000621714 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
SLC38A3-209ENST00000621714 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
SLC38A3-209ENST00000621714 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
SLC38A3-209ENST00000621714 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.811e-6■■■■■ 26.9
SLC38A3-209ENST00000621714 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
SLC38A3-209ENST00000621714 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
SLC38A3-209ENST00000621714 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
SLC38A3-209ENST00000621714 GRIN2BQ13224 1484 aa26.19■■□□□ 1.78
SLC38A3-209ENST00000621714 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
SLC38A3-209ENST00000621714 MAGI1Q96QZ7 1491 aaPredicted RBP26.13■■□□□ 1.77
SLC38A3-209ENST00000621714 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
SLC38A3-209ENST00000621714 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
SLC38A3-209ENST00000621714 OSCARQ8IYS5 282 aa26.09■■□□□ 1.77
SLC38A3-209ENST00000621714 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
SLC38A3-209ENST00000621714 SYNJ2O15056 1496 aa26.02■■□□□ 1.76
SLC38A3-209ENST00000621714 CHD1O14646 1710 aa26■■□□□ 1.75
SLC38A3-209ENST00000621714 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
SLC38A3-209ENST00000621714 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
SLC38A3-209ENST00000621714 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
SLC38A3-209ENST00000621714 FHAD1B1AJZ9 1412 aa25.92■■□□□ 1.74
SLC38A3-209ENST00000621714 FBLN2P98095 1184 aa25.92■■□□□ 1.74
SLC38A3-209ENST00000621714 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
SLC38A3-209ENST00000621714 IGF1RP08069 1367 aa25.87■■□□□ 1.73
SLC38A3-209ENST00000621714 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
SLC38A3-209ENST00000621714 CLASP1Q7Z460 1538 aa25.81■■□□□ 1.72
SLC38A3-209ENST00000621714 CUL7Q14999 1698 aa25.78■■□□□ 1.72
SLC38A3-209ENST00000621714 NUP160Q12769 1436 aa25.77■■□□□ 1.72
SLC38A3-209ENST00000621714 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
SLC38A3-209ENST00000621714 CEP170Q5SW79 1584 aa25.7■■□□□ 1.71
SLC38A3-209ENST00000621714 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
SLC38A3-209ENST00000621714 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
SLC38A3-209ENST00000621714 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
SLC38A3-209ENST00000621714 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
SLC38A3-209ENST00000621714 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
SLC38A3-209ENST00000621714 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
SLC38A3-209ENST00000621714 EEA1Q15075 1411 aa25.58■■□□□ 1.69
SLC38A3-209ENST00000621714 RAPGEF2Q9Y4G8 1499 aa25.56■■□□□ 1.68
SLC38A3-209ENST00000621714 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms