RNA–Protein interactions for RNA: ENST00000562251.5

ACSM3-207, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 2

Gene ACSM3, Length 1,931 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-207ENST00000562251 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
ACSM3-207ENST00000562251 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
ACSM3-207ENST00000562251 NISCHQ9Y2I1 1504 aa15.9■□□□□ 0.14
ACSM3-207ENST00000562251 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
ACSM3-207ENST00000562251 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
ACSM3-207ENST00000562251 FOXD1Q16676 465 aa14.43□□□□□ -0.1
ACSM3-207ENST00000562251 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.2
ACSM3-207ENST00000562251 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
ACSM3-207ENST00000562251 MSH5O43196 834 aa13.64□□□□□ -0.23
ACSM3-207ENST00000562251 PLPPR3Q6T4P5 718 aa13.46□□□□□ -0.25
ACSM3-207ENST00000562251 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
ACSM3-207ENST00000562251 ZCCHC6Q5VYS8 1495 aaKnown RBP13.41□□□□□ -0.26
ACSM3-207ENST00000562251 PPP6R1Q9UPN7 881 aa13.28□□□□□ -0.28
ACSM3-207ENST00000562251 ADRA2BP18089 450 aa13.25□□□□□ -0.29
ACSM3-207ENST00000562251 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
ACSM3-207ENST00000562251 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
ACSM3-207ENST00000562251 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
ACSM3-207ENST00000562251 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
ACSM3-207ENST00000562251 ABCC9O60706 1549 aa12.86□□□□□ -0.35
ACSM3-207ENST00000562251 SUPT5HO00267 1087 aaKnown RBP12.82□□□□□ -0.36
ACSM3-207ENST00000562251 NACADO15069 1562 aa12.77□□□□□ -0.36
ACSM3-207ENST00000562251 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
ACSM3-207ENST00000562251 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
ACSM3-207ENST00000562251 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
ACSM3-207ENST00000562251 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
ACSM3-207ENST00000562251 CECR2Q9BXF3 1484 aa12.34□□□□□ -0.43
ACSM3-207ENST00000562251 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
ACSM3-207ENST00000562251 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
ACSM3-207ENST00000562251 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
ACSM3-207ENST00000562251 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
ACSM3-207ENST00000562251 WIZO95785 1651 aa12.23□□□□□ -0.45
ACSM3-207ENST00000562251 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
ACSM3-207ENST00000562251 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
ACSM3-207ENST00000562251 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
ACSM3-207ENST00000562251 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
ACSM3-207ENST00000562251 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
ACSM3-207ENST00000562251 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
ACSM3-207ENST00000562251 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
ACSM3-207ENST00000562251 PEG3Q9GZU2 1588 aa11.99□□□□□ -0.49
ACSM3-207ENST00000562251 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
ACSM3-207ENST00000562251 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
ACSM3-207ENST00000562251 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
ACSM3-207ENST00000562251 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
ACSM3-207ENST00000562251 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
ACSM3-207ENST00000562251 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
ACSM3-207ENST00000562251 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
ACSM3-207ENST00000562251 KCNA4P22459 653 aa11.83□□□□□ -0.52
ACSM3-207ENST00000562251 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
ACSM3-207ENST00000562251 HMGXB3Q12766 1538 aa11.79□□□□□ -0.52
ACSM3-207ENST00000562251 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
ACSM3-207ENST00000562251 NCAPD3P42695 1498 aa11.77□□□□□ -0.53
ACSM3-207ENST00000562251 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
ACSM3-207ENST00000562251 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
ACSM3-207ENST00000562251 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
ACSM3-207ENST00000562251 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
ACSM3-207ENST00000562251 EEA1Q15075 1411 aa11.67□□□□□ -0.54
ACSM3-207ENST00000562251 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
ACSM3-207ENST00000562251 SOGA1O94964 1423 aa11.63□□□□□ -0.55
ACSM3-207ENST00000562251 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
ACSM3-207ENST00000562251 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
ACSM3-207ENST00000562251 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
ACSM3-207ENST00000562251 RNF39Q9H2S5 420 aa11.58□□□□□ -0.55
ACSM3-207ENST00000562251 TOP2BQ02880 1626 aa11.58□□□□□ -0.56
ACSM3-207ENST00000562251 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
ACSM3-207ENST00000562251 CFTRP13569 1480 aa11.58□□□□□ -0.56
ACSM3-207ENST00000562251 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
ACSM3-207ENST00000562251 PRDM2Q13029 1718 aa11.56□□□□□ -0.56
ACSM3-207ENST00000562251 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
ACSM3-207ENST00000562251 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
ACSM3-207ENST00000562251 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
ACSM3-207ENST00000562251 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
ACSM3-207ENST00000562251 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
ACSM3-207ENST00000562251 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
ACSM3-207ENST00000562251 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
ACSM3-207ENST00000562251 KIF21BO75037 1637 aa11.5□□□□□ -0.57
ACSM3-207ENST00000562251 UBTFP17480 764 aaKnown RBP11.5□□□□□ -0.57
ACSM3-207ENST00000562251 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
ACSM3-207ENST00000562251 CUX1P39880 1505 aa11.5□□□□□ -0.57
ACSM3-207ENST00000562251 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
ACSM3-207ENST00000562251 HRCP23327 699 aa11.45□□□□□ -0.58
ACSM3-207ENST00000562251 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
ACSM3-207ENST00000562251 KIF27Q86VH2 1401 aa11.41□□□□□ -0.58
ACSM3-207ENST00000562251 FANCD2Q9BXW9 1451 aa11.4□□□□□ -0.58
ACSM3-207ENST00000562251 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
ACSM3-207ENST00000562251 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
ACSM3-207ENST00000562251 ERICH3Q5RHP9 1530 aa11.38□□□□□ -0.59
ACSM3-207ENST00000562251 LAMC3Q9Y6N6 1575 aa11.36□□□□□ -0.59
ACSM3-207ENST00000562251 CLIP1P30622 1438 aa11.35□□□□□ -0.59
ACSM3-207ENST00000562251 FGD5Q6ZNL6 1462 aa11.35□□□□□ -0.59
ACSM3-207ENST00000562251 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
ACSM3-207ENST00000562251 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
ACSM3-207ENST00000562251 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.59
ACSM3-207ENST00000562251 NESP48681 1621 aa11.33□□□□□ -0.6
ACSM3-207ENST00000562251 DNAJC5BQ9UF47 199 aa11.33□□□□□ -0.6
ACSM3-207ENST00000562251 CUX2O14529 1486 aa11.33□□□□□ -0.6
ACSM3-207ENST00000562251 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
ACSM3-207ENST00000562251 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
ACSM3-207ENST00000562251 VPS8Q8N3P4 1428 aa11.28□□□□□ -0.6
ACSM3-207ENST00000562251 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
ACSM3-207ENST00000562251 RANGAP1P46060 587 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms