RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
CAPNS1-208ENST00000589162 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
CAPNS1-208ENST00000589162 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
CAPNS1-208ENST00000589162 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
CAPNS1-208ENST00000589162 FOXD1Q16676 465 aa16.87■□□□□ 0.29
CAPNS1-208ENST00000589162 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
CAPNS1-208ENST00000589162 MSH5O43196 834 aa16.21■□□□□ 0.19
CAPNS1-208ENST00000589162 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
CAPNS1-208ENST00000589162 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
CAPNS1-208ENST00000589162 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
CAPNS1-208ENST00000589162 ADRA2BP18089 450 aa15.22■□□□□ 0.03
CAPNS1-208ENST00000589162 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
CAPNS1-208ENST00000589162 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
CAPNS1-208ENST00000589162 NISCHQ9Y2I1 1504 aa14.15□□□□□ -0.14
CAPNS1-208ENST00000589162 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
CAPNS1-208ENST00000589162 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
CAPNS1-208ENST00000589162 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
CAPNS1-208ENST00000589162 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
CAPNS1-208ENST00000589162 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CAPNS1-208ENST00000589162 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
CAPNS1-208ENST00000589162 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
CAPNS1-208ENST00000589162 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
CAPNS1-208ENST00000589162 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
CAPNS1-208ENST00000589162 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
CAPNS1-208ENST00000589162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.33
CAPNS1-208ENST00000589162 NCBP3Q53F19 620 aaKnown RBP12.92□□□□□ -0.34
CAPNS1-208ENST00000589162 POTEHQ6S545 545 aa12.9□□□□□ -0.34
CAPNS1-208ENST00000589162 DSG3P32926 999 aa12.59□□□□□ -0.39
CAPNS1-208ENST00000589162 CAPN15O75808 1086 aa12.56□□□□□ -0.4
CAPNS1-208ENST00000589162 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
CAPNS1-208ENST00000589162 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
CAPNS1-208ENST00000589162 APLP2Q06481 763 aa12.45□□□□□ -0.42
CAPNS1-208ENST00000589162 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
CAPNS1-208ENST00000589162 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
CAPNS1-208ENST00000589162 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
CAPNS1-208ENST00000589162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
CAPNS1-208ENST00000589162 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
CAPNS1-208ENST00000589162 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
CAPNS1-208ENST00000589162 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
CAPNS1-208ENST00000589162 ABCB7O75027 752 aa12.1□□□□□ -0.47
CAPNS1-208ENST00000589162 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
CAPNS1-208ENST00000589162 ABCC9O60706 1549 aa12.05□□□□□ -0.48
CAPNS1-208ENST00000589162 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CAPNS1-208ENST00000589162 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
CAPNS1-208ENST00000589162 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
CAPNS1-208ENST00000589162 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
CAPNS1-208ENST00000589162 DCAF8L2P0C7V8 631 aa11.84□□□□□ -0.51
CAPNS1-208ENST00000589162 POLA2Q14181 598 aa11.78□□□□□ -0.52
CAPNS1-208ENST00000589162 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
CAPNS1-208ENST00000589162 KCNA4P22459 653 aa11.73□□□□□ -0.53
CAPNS1-208ENST00000589162 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
CAPNS1-208ENST00000589162 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
CAPNS1-208ENST00000589162 DCAF1Q9Y4B6 1507 aa11.61□□□□□ -0.55
CAPNS1-208ENST00000589162 NACADO15069 1562 aa11.6□□□□□ -0.55
CAPNS1-208ENST00000589162 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.56
CAPNS1-208ENST00000589162 HAX1O00165 279 aa11.56□□□□□ -0.56
CAPNS1-208ENST00000589162 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
CAPNS1-208ENST00000589162 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
CAPNS1-208ENST00000589162 MYO15BQ96JP2 1530 aa11.54□□□□□ -0.56
CAPNS1-208ENST00000589162 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.56
CAPNS1-208ENST00000589162 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
CAPNS1-208ENST00000589162 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.575e-6■■□□□ 12.9
CAPNS1-208ENST00000589162 UNC13AQ9UPW8 1703 aa11.43□□□□□ -0.58
CAPNS1-208ENST00000589162 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
CAPNS1-208ENST00000589162 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
CAPNS1-208ENST00000589162 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPNS1-208ENST00000589162 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
CAPNS1-208ENST00000589162 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
CAPNS1-208ENST00000589162 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
CAPNS1-208ENST00000589162 SPDYE2BA6NHP3 402 aa11.21□□□□□ -0.61
CAPNS1-208ENST00000589162 SPDYE6P0CI01 402 aa11.21□□□□□ -0.61
CAPNS1-208ENST00000589162 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
CAPNS1-208ENST00000589162 EVX2Q03828 476 aa11.18□□□□□ -0.62
CAPNS1-208ENST00000589162 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
CAPNS1-208ENST00000589162 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
CAPNS1-208ENST00000589162 FBLN2P98095 1184 aa11.12□□□□□ -0.63
CAPNS1-208ENST00000589162 LHX8Q68G74 356 aa11.12□□□□□ -0.63
CAPNS1-208ENST00000589162 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
CAPNS1-208ENST00000589162 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
CAPNS1-208ENST00000589162 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
CAPNS1-208ENST00000589162 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
CAPNS1-208ENST00000589162 GABBR2O75899 941 aa11.05□□□□□ -0.64
CAPNS1-208ENST00000589162 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
CAPNS1-208ENST00000589162 CLCN6P51797 869 aa11.03□□□□□ -0.64
CAPNS1-208ENST00000589162 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
CAPNS1-208ENST00000589162 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
CAPNS1-208ENST00000589162 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
CAPNS1-208ENST00000589162 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
CAPNS1-208ENST00000589162 SUPT5HO00267 1087 aaKnown RBP10.92□□□□□ -0.66
CAPNS1-208ENST00000589162 BAZ1AQ9NRL2 1556 aaPredicted RBP10.91□□□□□ -0.66
CAPNS1-208ENST00000589162 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
CAPNS1-208ENST00000589162 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
CAPNS1-208ENST00000589162 WIZO95785 1651 aa10.9□□□□□ -0.66
CAPNS1-208ENST00000589162 CC2D2AQ9P2K1 1620 aa10.87□□□□□ -0.67
CAPNS1-208ENST00000589162 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
CAPNS1-208ENST00000589162 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
CAPNS1-208ENST00000589162 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
CAPNS1-208ENST00000589162 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
CAPNS1-208ENST00000589162 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
CAPNS1-208ENST00000589162 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms