RNA–Protein interactions for RNA: ENST00000535451.5

LDHA-213, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-213ENST00000535451 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
LDHA-213ENST00000535451 ABCC9O60706 1549 aa28.17■■■□□ 2.1
LDHA-213ENST00000535451 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.03
LDHA-213ENST00000535451 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
LDHA-213ENST00000535451 RB1CC1Q8TDY2 1594 aa26.62■■□□□ 1.85
LDHA-213ENST00000535451 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
LDHA-213ENST00000535451 NACADO15069 1562 aa26.35■■□□□ 1.81
LDHA-213ENST00000535451 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
LDHA-213ENST00000535451 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
LDHA-213ENST00000535451 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
LDHA-213ENST00000535451 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
LDHA-213ENST00000535451 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
LDHA-213ENST00000535451 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
LDHA-213ENST00000535451 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
LDHA-213ENST00000535451 SCRIBQ14160 1630 aa25.38■■□□□ 1.65
LDHA-213ENST00000535451 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
LDHA-213ENST00000535451 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
LDHA-213ENST00000535451 EIF4G1Q04637 1599 aaKnown RBP25.24■■□□□ 1.63
LDHA-213ENST00000535451 DNAJC5Q9H3Z4 198 aa24.68■■□□□ 1.54
LDHA-213ENST00000535451 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
LDHA-213ENST00000535451 ERCC6Q03468 1493 aa24.34■■□□□ 1.49
LDHA-213ENST00000535451 CUX2O14529 1486 aa24.31■■□□□ 1.48
LDHA-213ENST00000535451 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
LDHA-213ENST00000535451 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
LDHA-213ENST00000535451 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
LDHA-213ENST00000535451 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
LDHA-213ENST00000535451 NESP48681 1621 aa24.11■■□□□ 1.45
LDHA-213ENST00000535451 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
LDHA-213ENST00000535451 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
LDHA-213ENST00000535451 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
LDHA-213ENST00000535451 THOC2Q8NI27 1593 aaKnown RBP23.83■■□□□ 1.41
LDHA-213ENST00000535451 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
LDHA-213ENST00000535451 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
LDHA-213ENST00000535451 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
LDHA-213ENST00000535451 KIF21AQ7Z4S6 1674 aa23.72■■□□□ 1.39
LDHA-213ENST00000535451 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
LDHA-213ENST00000535451 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
LDHA-213ENST00000535451 MRC2Q9UBG0 1479 aa23.55■■□□□ 1.36
LDHA-213ENST00000535451 WIZO95785 1651 aa23.51■■□□□ 1.35
LDHA-213ENST00000535451 WDR62O43379 1518 aa23.46■■□□□ 1.35
LDHA-213ENST00000535451 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
LDHA-213ENST00000535451 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
LDHA-213ENST00000535451 CFTRP13569 1480 aa23.28■■□□□ 1.32
LDHA-213ENST00000535451 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
LDHA-213ENST00000535451 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
LDHA-213ENST00000535451 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
LDHA-213ENST00000535451 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
LDHA-213ENST00000535451 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
LDHA-213ENST00000535451 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
LDHA-213ENST00000535451 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
LDHA-213ENST00000535451 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
LDHA-213ENST00000535451 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
LDHA-213ENST00000535451 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
LDHA-213ENST00000535451 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
LDHA-213ENST00000535451 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
LDHA-213ENST00000535451 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
LDHA-213ENST00000535451 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
LDHA-213ENST00000535451 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
LDHA-213ENST00000535451 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
LDHA-213ENST00000535451 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
LDHA-213ENST00000535451 AQRO60306 1485 aaKnown RBP eCLIP22.74■■□□□ 1.237e-13■■■■□ 23.2
LDHA-213ENST00000535451 FBLN2P98095 1184 aa22.74■■□□□ 1.23
LDHA-213ENST00000535451 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
LDHA-213ENST00000535451 CHD1O14646 1710 aa22.65■■□□□ 1.22
LDHA-213ENST00000535451 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
LDHA-213ENST00000535451 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
LDHA-213ENST00000535451 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
LDHA-213ENST00000535451 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
LDHA-213ENST00000535451 ARAP1Q96P48 1450 aa22.58■■□□□ 1.2
LDHA-213ENST00000535451 SOGA1O94964 1423 aa22.57■■□□□ 1.2
LDHA-213ENST00000535451 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
LDHA-213ENST00000535451 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
LDHA-213ENST00000535451 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
LDHA-213ENST00000535451 CUX1P39880 1505 aa22.39■■□□□ 1.17
LDHA-213ENST00000535451 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
LDHA-213ENST00000535451 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
LDHA-213ENST00000535451 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
LDHA-213ENST00000535451 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
LDHA-213ENST00000535451 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
LDHA-213ENST00000535451 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
LDHA-213ENST00000535451 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
LDHA-213ENST00000535451 PBRM1Q86U86 1689 aa22.2■■□□□ 1.15
LDHA-213ENST00000535451 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
LDHA-213ENST00000535451 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
LDHA-213ENST00000535451 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
LDHA-213ENST00000535451 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
LDHA-213ENST00000535451 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
LDHA-213ENST00000535451 GRIN2AQ12879 1464 aa22.07■■□□□ 1.12
LDHA-213ENST00000535451 ERCC6L2Q5T890 1561 aa22.06■■□□□ 1.12
LDHA-213ENST00000535451 ADAMTS12P58397 1594 aa22■■□□□ 1.11
LDHA-213ENST00000535451 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
LDHA-213ENST00000535451 NUP160Q12769 1436 aa21.98■■□□□ 1.11
LDHA-213ENST00000535451 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
LDHA-213ENST00000535451 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
LDHA-213ENST00000535451 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
LDHA-213ENST00000535451 SHROOM2Q13796 1616 aa21.89■■□□□ 1.09
LDHA-213ENST00000535451 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
LDHA-213ENST00000535451 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
LDHA-213ENST00000535451 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
LDHA-213ENST00000535451 NPM1P06748 294 aaKnown RBP eCLIP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms