Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.53■□□□□ 0.08
CTSDP07339 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.53■□□□□ 0.08
CTSDP07339 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CTSDP07339 AC105036.2-201ENST00000569468 176 ntBASIC15.53■□□□□ 0.08
CTSDP07339 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 SIRPAP1-201ENST00000448467 1770 ntBASIC15.53■□□□□ 0.08
CTSDP07339 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
CTSDP07339 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.53■□□□□ 0.08
CTSDP07339 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTSDP07339 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.52■□□□□ 0.08
CTSDP07339 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.52■□□□□ 0.08
CTSDP07339 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CTSDP07339 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.52■□□□□ 0.08
CTSDP07339 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.52■□□□□ 0.08
CTSDP07339 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTSDP07339 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CTSDP07339 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CTSDP07339 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTSDP07339 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTSDP07339 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
CTSDP07339 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CTSDP07339 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTSDP07339 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.52■□□□□ 0.07
CTSDP07339 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CTSDP07339 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTSDP07339 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTSDP07339 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTSDP07339 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.52■□□□□ 0.07
CTSDP07339 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.51■□□□□ 0.07
CTSDP07339 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 DUSP5P2-201ENST00000426873 1033 ntBASIC15.51■□□□□ 0.07
CTSDP07339 CDCA4P2-201ENST00000441182 718 ntBASIC15.51■□□□□ 0.07
CTSDP07339 AC026185.1-201ENST00000445748 174 ntBASIC15.51■□□□□ 0.07
CTSDP07339 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.51■□□□□ 0.07
CTSDP07339 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.51■□□□□ 0.07
CTSDP07339 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms