RNA–Protein interactions for RNA: ENST00000399878.7

SEL1L3-202, Transcript of SEL1L family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L3, Length 4,520 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-202ENST00000399878 NISCHQ9Y2I1 1504 aa33.91■■■■□ 3.02
SEL1L3-202ENST00000399878 DCAF8L2P0C7V8 631 aa33■■■□□ 2.87
SEL1L3-202ENST00000399878 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
SEL1L3-202ENST00000399878 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
SEL1L3-202ENST00000399878 EHMT2Q96KQ7 1210 aa30.04■■■□□ 2.4
SEL1L3-202ENST00000399878 FAM9AQ8IZU1 332 aaPredicted RBP29.48■■■□□ 2.31
SEL1L3-202ENST00000399878 ABCC9O60706 1549 aa29.05■■■□□ 2.24
SEL1L3-202ENST00000399878 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
SEL1L3-202ENST00000399878 TTBK1Q5TCY1 1321 aaPredicted RBP28.83■■■□□ 2.21
SEL1L3-202ENST00000399878 RANGAP1P46060 587 aaPredicted RBP28.72■■■□□ 2.19
SEL1L3-202ENST00000399878 PCGF6Q9BYE7 350 aa28.66■■■□□ 2.18
SEL1L3-202ENST00000399878 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.17
SEL1L3-202ENST00000399878 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
SEL1L3-202ENST00000399878 LOC105371045A0A1W2PR82 267 aa28.41■■■□□ 2.14
SEL1L3-202ENST00000399878 APLP2Q06481 763 aa28.31■■■□□ 2.12
SEL1L3-202ENST00000399878 PPARGC1BQ86YN6 1023 aaKnown RBP28.31■■■□□ 2.12
SEL1L3-202ENST00000399878 UBTFP17480 764 aaKnown RBP28.29■■■□□ 2.12
SEL1L3-202ENST00000399878 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
SEL1L3-202ENST00000399878 ATP1B4Q9UN42 357 aaPredicted RBP28■■■□□ 2.07
SEL1L3-202ENST00000399878 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.06
SEL1L3-202ENST00000399878 SCRIBQ14160 1630 aa27.85■■■□□ 2.05
SEL1L3-202ENST00000399878 CCER1Q8TC90 406 aaPredicted RBP27.66■■■□□ 2.02
SEL1L3-202ENST00000399878 TRIM26Q12899 539 aaPredicted RBP27.47■■□□□ 1.99
SEL1L3-202ENST00000399878 ITGAEP38570 1179 aa27.34■■□□□ 1.97
SEL1L3-202ENST00000399878 HNRNPUL2Q1KMD3 747 aaKnown RBP27.25■■□□□ 1.95
SEL1L3-202ENST00000399878 ZEB1P37275 1124 aaPredicted RBP27.14■■□□□ 1.94
SEL1L3-202ENST00000399878 HRCP23327 699 aa27.11■■□□□ 1.93
SEL1L3-202ENST00000399878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
SEL1L3-202ENST00000399878 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
SEL1L3-202ENST00000399878 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
SEL1L3-202ENST00000399878 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
SEL1L3-202ENST00000399878 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
SEL1L3-202ENST00000399878 NACADO15069 1562 aa26.91■■□□□ 1.9
SEL1L3-202ENST00000399878 P3H3Q8IVL6 736 aa26.84■■□□□ 1.89
SEL1L3-202ENST00000399878 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
SEL1L3-202ENST00000399878 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
SEL1L3-202ENST00000399878 FBLN2P98095 1184 aa26.76■■□□□ 1.87
SEL1L3-202ENST00000399878 YTHDC1Q96MU7 727 aaKnown RBP26.72■■□□□ 1.87
SEL1L3-202ENST00000399878 ARID3CA6NKF2 412 aa26.66■■□□□ 1.86
SEL1L3-202ENST00000399878 FAM50AQ14320 339 aaKnown RBP26.65■■□□□ 1.86
SEL1L3-202ENST00000399878 MYT1LQ9UL68 1186 aa26.52■■□□□ 1.84
SEL1L3-202ENST00000399878 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
SEL1L3-202ENST00000399878 CENPBP07199 599 aaPredicted RBP26.41■■□□□ 1.82
SEL1L3-202ENST00000399878 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
SEL1L3-202ENST00000399878 BAZ1AQ9NRL2 1556 aaPredicted RBP26.36■■□□□ 1.81
SEL1L3-202ENST00000399878 CNGB1Q14028 1251 aaPredicted RBP26.35■■□□□ 1.81
SEL1L3-202ENST00000399878 POLR3GLQ9BT43 218 aa26.31■■□□□ 1.8
SEL1L3-202ENST00000399878 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
SEL1L3-202ENST00000399878 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
SEL1L3-202ENST00000399878 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
SEL1L3-202ENST00000399878 DIEXFQ68CQ4 756 aaKnown RBP26.13■■□□□ 1.77
SEL1L3-202ENST00000399878 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
SEL1L3-202ENST00000399878 WIZO95785 1651 aa26.1■■□□□ 1.77
SEL1L3-202ENST00000399878 SOGA1O94964 1423 aa26.07■■□□□ 1.76
SEL1L3-202ENST00000399878 PELP1Q8IZL8 1130 aaKnown RBP26.05■■□□□ 1.76
SEL1L3-202ENST00000399878 ZNF777Q9ULD5 760 aaPredicted RBP26.03■■□□□ 1.76
SEL1L3-202ENST00000399878 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
SEL1L3-202ENST00000399878 CLIP1P30622 1438 aa26.02■■□□□ 1.76
SEL1L3-202ENST00000399878 CEP162Q5TB80 1403 aa25.98■■□□□ 1.75
SEL1L3-202ENST00000399878 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
SEL1L3-202ENST00000399878 CHIC2Q9UKJ5 165 aa25.85■■□□□ 1.73
SEL1L3-202ENST00000399878 GOLGA3Q08378 1498 aa25.84■■□□□ 1.73
SEL1L3-202ENST00000399878 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
SEL1L3-202ENST00000399878 EEA1Q15075 1411 aa25.8■■□□□ 1.72
SEL1L3-202ENST00000399878 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
SEL1L3-202ENST00000399878 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
SEL1L3-202ENST00000399878 ZNF316A6NFI3 1004 aaPredicted RBP25.73■■□□□ 1.71
SEL1L3-202ENST00000399878 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
SEL1L3-202ENST00000399878 NEFLP07196 543 aa25.71■■□□□ 1.71
SEL1L3-202ENST00000399878 CDK11AQ9UQ88 783 aaPredicted RBP25.71■■□□□ 1.71
SEL1L3-202ENST00000399878 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
SEL1L3-202ENST00000399878 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
SEL1L3-202ENST00000399878 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
SEL1L3-202ENST00000399878 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
SEL1L3-202ENST00000399878 CUX2O14529 1486 aa25.65■■□□□ 1.7
SEL1L3-202ENST00000399878 MTUS2Q5JR59 1369 aa25.65■■□□□ 1.7
SEL1L3-202ENST00000399878 SLC4A1APQ9BWU0 796 aaKnown RBP25.59■■□□□ 1.69
SEL1L3-202ENST00000399878 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
SEL1L3-202ENST00000399878 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
SEL1L3-202ENST00000399878 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
SEL1L3-202ENST00000399878 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
SEL1L3-202ENST00000399878 RRP7BPQ9NSQ0 103 aa25.52■■□□□ 1.68
SEL1L3-202ENST00000399878 HIRIP3Q9BW71 556 aaPredicted RBP25.49■■□□□ 1.67
SEL1L3-202ENST00000399878 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
SEL1L3-202ENST00000399878 KCNH8Q96L42 1107 aa25.45■■□□□ 1.67
SEL1L3-202ENST00000399878 KANK4Q5T7N3 995 aaPredicted RBP25.43■■□□□ 1.66
SEL1L3-202ENST00000399878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.66
SEL1L3-202ENST00000399878 NPM1P06748 294 aaKnown RBP eCLIP25.39■■□□□ 1.66
SEL1L3-202ENST00000399878 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
SEL1L3-202ENST00000399878 ANP32CO43423 234 aa25.35■■□□□ 1.65
SEL1L3-202ENST00000399878 DDX10Q13206 875 aaKnown RBP25.35■■□□□ 1.65
SEL1L3-202ENST00000399878 PLPPR3Q6T4P5 718 aa25.31■■□□□ 1.64
SEL1L3-202ENST00000399878 GTF3C3Q9Y5Q9 886 aa25.31■■□□□ 1.64
SEL1L3-202ENST00000399878 RAPGEF2Q9Y4G8 1499 aa25.29■■□□□ 1.64
SEL1L3-202ENST00000399878 TSPY4P0CV99 314 aa25.28■■□□□ 1.64
SEL1L3-202ENST00000399878 TSPY10P0CW01 314 aa25.28■■□□□ 1.64
SEL1L3-202ENST00000399878 PLEKHD1A6NEE1 506 aa25.26■■□□□ 1.63
SEL1L3-202ENST00000399878 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
SEL1L3-202ENST00000399878 BCANQ96GW7 911 aa25.26■■□□□ 1.63
SEL1L3-202ENST00000399878 PDS5BQ9NTI5 1447 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms