Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.1■□□□□ 0.65
CASC4Q6P4E1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 KRT8P11-201ENST00000409686 1436 ntBASIC19.09■□□□□ 0.65
CASC4Q6P4E1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 AC018470.1-201ENST00000624790 3129 ntBASIC19.09■□□□□ 0.65
CASC4Q6P4E1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CASC4Q6P4E1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CASC4Q6P4E1 RCC2P6-201ENST00000526625 1557 ntBASIC19.08■□□□□ 0.65
CASC4Q6P4E1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 AC004980.1-204ENST00000429707 299 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms