Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.372e-6■■■□□ 18.3
MATR3P43243 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.932e-6■■■□□ 18.3
MATR3P43243 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.92e-6■■■□□ 18.3
MATR3P43243 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.272e-6■■■□□ 18.3
MATR3P43243 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.152e-6■■■□□ 18.3
MATR3P43243 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.352e-6■■■□□ 18.3
MATR3P43243 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.352e-6■■■□□ 18.3
MATR3P43243 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.452e-6■■■□□ 18.3
MATR3P43243 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.452e-6■■■□□ 18.3
MATR3P43243 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.642e-6■■■□□ 18.3
MATR3P43243 WWP1-210ENST00000523863 796 ntTSL 321.84■■□□□ 1.091e-6■■■□□ 18.3
MATR3P43243 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.871e-6■■■□□ 18.3
MATR3P43243 FAM178B-205ENST00000494172 592 ntTSL 319.64■□□□□ 0.736e-7■■■□□ 18.2
MATR3P43243 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.146e-7■■■□□ 18.2
MATR3P43243 FAM178B-202ENST00000470789 722 ntTSL 1 (best)12.32□□□□□ -0.446e-7■■■□□ 18.2
MATR3P43243 ST6GAL1-214ENST00000455441 596 ntTSL 422.32■■□□□ 1.162e-6■■■□□ 18.2
MATR3P43243 ST6GAL1-205ENST00000427315 544 ntTSL 422.24■■□□□ 1.152e-6■■■□□ 18.2
MATR3P43243 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.22e-6■■■□□ 18.2
MATR3P43243 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC14.13□□□□□ -0.152e-6■■■□□ 18.2
MATR3P43243 ST6GAL1-213ENST00000448449 1055 ntTSL 58.17□□□□□ -1.12e-6■■■□□ 18.2
MATR3P43243 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.132e-6■■■□□ 18.2
MATR3P43243 ST6GAL1-209ENST00000442023 570 ntTSL 45.87□□□□□ -1.472e-6■■■□□ 18.2
MATR3P43243 NAA15-205ENST00000482087 550 ntTSL 421.33■■□□□ 1.015e-9■■■□□ 18.2
MATR3P43243 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.065e-9■■■□□ 18.2
MATR3P43243 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.045e-9■■■□□ 18.2
MATR3P43243 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.765e-9■■■□□ 18.2
MATR3P43243 ATP13A3-205ENST00000457986 490 ntTSL 326.97■■□□□ 1.916e-8■■■□□ 18.2
MATR3P43243 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.7□□□□□ -0.067e-7■■■□□ 18.2
MATR3P43243 FTO-209ENST00000570395 555 ntTSL 413.88□□□□□ -0.197e-7■■■□□ 18.2
MATR3P43243 FTO-221ENST00000637845 2472 ntTSL 510.49□□□□□ -0.737e-7■■■□□ 18.2
MATR3P43243 FTO-217ENST00000637001 1609 ntTSL 5 BASIC10.26□□□□□ -0.777e-7■■■□□ 18.2
MATR3P43243 FTO-212ENST00000636030 1636 ntTSL 510□□□□□ -0.817e-7■■■□□ 18.2
MATR3P43243 FTO-216ENST00000636992 1514 ntTSL 59.66□□□□□ -0.867e-7■■■□□ 18.2
MATR3P43243 FTO-222ENST00000637969 2889 ntTSL 5 BASIC9.33□□□□□ -0.927e-7■■■□□ 18.2
MATR3P43243 FTO-220ENST00000637562 1524 ntTSL 59.23□□□□□ -0.937e-7■■■□□ 18.2
MATR3P43243 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.057e-7■■■□□ 18.2
MATR3P43243 FTO-205ENST00000464071 1065 ntTSL 27.06□□□□□ -1.287e-7■■■□□ 18.2
MATR3P43243 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.05□□□□□ -1.287e-7■■■□□ 18.2
MATR3P43243 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.34□□□□□ -1.717e-7■■■□□ 18.2
MATR3P43243 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.53e-9■■■□□ 18.2
MATR3P43243 UBAC1-203ENST00000471163 838 ntTSL 317.8■□□□□ 0.442e-7■■■□□ 18.2
MATR3P43243 UBAC1-202ENST00000465873 882 ntTSL 217.78■□□□□ 0.442e-7■■■□□ 18.2
MATR3P43243 UBAC1-206ENST00000489050 864 ntTSL 310.16□□□□□ -0.782e-7■■■□□ 18.2
MATR3P43243 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.42e-6■■■□□ 18.2
MATR3P43243 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.622e-6■■■□□ 18.2
MATR3P43243 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.452e-6■■■□□ 18.2
MATR3P43243 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.011e-6■■■□□ 18.2
MATR3P43243 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.33■■□□□ 1.166e-7■■■□□ 18.2
MATR3P43243 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.07■□□□□ 0.86e-7■■■□□ 18.2
MATR3P43243 TUBGCP3-207ENST00000611152 1508 ntTSL 317.27■□□□□ 0.366e-7■■■□□ 18.2
MATR3P43243 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.176e-7■■■□□ 18.2
MATR3P43243 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.411e-9■■■□□ 18.2
MATR3P43243 PSMD13-202ENST00000382671 1489 ntTSL 1 (best)17.26■□□□□ 0.351e-9■■■□□ 18.2
MATR3P43243 PSMD13-204ENST00000525665 1632 ntTSL 516.7■□□□□ 0.261e-9■■■□□ 18.2
MATR3P43243 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.47■□□□□ 0.231e-9■■■□□ 18.2
MATR3P43243 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.35■□□□□ 0.211e-9■■■□□ 18.2
MATR3P43243 PSMD13-208ENST00000528906 858 ntTSL 514.26□□□□□ -0.131e-9■■■□□ 18.2
MATR3P43243 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC13.52□□□□□ -0.251e-9■■■□□ 18.2
MATR3P43243 PSMD13-206ENST00000527047 1284 ntTSL 1 (best)12.84□□□□□ -0.351e-9■■■□□ 18.2
MATR3P43243 PSMD13-209ENST00000529372 612 ntTSL 512.48□□□□□ -0.411e-9■■■□□ 18.2
MATR3P43243 PSMD13-214ENST00000534590 787 ntTSL 510.67□□□□□ -0.71e-9■■■□□ 18.2
MATR3P43243 DLG1-214ENST00000447466 858 ntTSL 1 (best)6.89□□□□□ -1.318e-8■■■□□ 18.2
MATR3P43243 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.21□□□□□ -1.428e-8■■■□□ 18.2
MATR3P43243 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.55□□□□□ -1.688e-8■■■□□ 18.2
MATR3P43243 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.157e-7■■■□□ 18.2
MATR3P43243 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.95■■□□□ 1.911e-6■■■□□ 18.2
MATR3P43243 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.931e-6■■■□□ 18.2
MATR3P43243 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.921e-6■■■□□ 18.2
MATR3P43243 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.561e-6■■■□□ 18.2
MATR3P43243 DDX42-212ENST00000581135 589 ntTSL 418.01■□□□□ 0.471e-6■■■□□ 18.2
MATR3P43243 TASP1-203ENST00000455532 1000 ntTSL 510.3□□□□□ -0.762e-6■■■□□ 18.2
MATR3P43243 HSD17B4-224ENST00000519184 196 ntTSL 222.1■■□□□ 1.132e-6■■■□□ 18.2
MATR3P43243 HSD17B4-216ENST00000511186 553 ntTSL 517.82■□□□□ 0.442e-6■■■□□ 18.2
MATR3P43243 HSD17B4-219ENST00000512841 584 ntTSL 213.18□□□□□ -0.32e-6■■■□□ 18.2
MATR3P43243 HSD17B4-204ENST00000503168 589 ntTSL 27.55□□□□□ -1.22e-6■■■□□ 18.2
MATR3P43243 HSD17B4-209ENST00000507695 324 ntTSL 54.48□□□□□ -1.692e-6■■■□□ 18.2
MATR3P43243 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.032e-8■■■□□ 18.2
MATR3P43243 ABCA11P-203ENST00000507854 1503 ntTSL 1 (best)11.52□□□□□ -0.572e-8■■■□□ 18.2
MATR3P43243 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC9.89□□□□□ -0.832e-8■■■□□ 18.2
MATR3P43243 ZNF721-206ENST00000515578 1679 ntTSL 1 (best)9.63□□□□□ -0.872e-8■■■□□ 18.2
MATR3P43243 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.17□□□□□ -1.12e-8■■■□□ 18.2
MATR3P43243 ZNF721-202ENST00000505900 664 ntTSL 1 (best)7.86□□□□□ -1.152e-8■■■□□ 18.2
MATR3P43243 ABCA11P-204ENST00000514396 1423 ntTSL 1 (best)6.9□□□□□ -1.312e-8■■■□□ 18.2
MATR3P43243 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.25□□□□□ -1.412e-8■■■□□ 18.2
MATR3P43243 ZNF721-204ENST00000507078 355 ntTSL 52.4□□□□□ -2.032e-8■■■□□ 18.2
MATR3P43243 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.693e-6■■■□□ 18.1
MATR3P43243 SLC39A10-205ENST00000430412 4478 ntTSL 26.67□□□□□ -1.344e-6■■■□□ 18.1
MATR3P43243 CFDP1-204ENST00000564793 457 ntTSL 35.26□□□□□ -1.573e-9■■■□□ 18.1
MATR3P43243 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.764e-6■■■□□ 18.1
MATR3P43243 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.014e-6■■■□□ 18.1
MATR3P43243 CTDSPL-204ENST00000435525 371 ntTSL 318.15■□□□□ 0.52e-6■■■□□ 18.1
MATR3P43243 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.045e-7■■■□□ 18.1
MATR3P43243 FARP1-231ENST00000600648 433 ntTSL 523.59■■□□□ 1.371e-7■■■□□ 18.1
MATR3P43243 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.91■□□□□ 0.622e-7■■■□□ 18.1
MATR3P43243 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.052e-7■■■□□ 18.1
MATR3P43243 LRRC8D-205ENST00000525774 588 ntTSL 426.23■■□□□ 1.795e-7■■■□□ 18.1
MATR3P43243 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.325e-7■■■□□ 18.1
MATR3P43243 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.195e-7■■■□□ 18.1
MATR3P43243 LRRC8D-206ENST00000527156 922 ntTSL 212.44□□□□□ -0.425e-7■■■□□ 18.1
MATR3P43243 LRRC8D-207ENST00000532201 597 ntTSL 411.72□□□□□ -0.535e-7■■■□□ 18.1
Retrieved 100 of 16,209 protein–RNA pairs in 132.6 ms