RNA–Protein interactions for RNA: ENST00000525665.5

PSMD13-204, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5

Gene PSMD13, Length 1,632 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-204ENST00000525665 NISCHQ9Y2I1 1504 aa35.89■■■■□ 3.34
PSMD13-204ENST00000525665 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
PSMD13-204ENST00000525665 ABCC9O60706 1549 aa30.5■■■□□ 2.47
PSMD13-204ENST00000525665 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.39
PSMD13-204ENST00000525665 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
PSMD13-204ENST00000525665 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
PSMD13-204ENST00000525665 NACADO15069 1562 aa29.64■■■□□ 2.33
PSMD13-204ENST00000525665 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
PSMD13-204ENST00000525665 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
PSMD13-204ENST00000525665 SCRIBQ14160 1630 aa28.97■■■□□ 2.23
PSMD13-204ENST00000525665 UNC13AQ9UPW8 1703 aa28.85■■■□□ 2.21
PSMD13-204ENST00000525665 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
PSMD13-204ENST00000525665 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.17
PSMD13-204ENST00000525665 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
PSMD13-204ENST00000525665 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
PSMD13-204ENST00000525665 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
PSMD13-204ENST00000525665 BAZ1AQ9NRL2 1556 aaPredicted RBP27.79■■■□□ 2.04
PSMD13-204ENST00000525665 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
PSMD13-204ENST00000525665 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
PSMD13-204ENST00000525665 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
PSMD13-204ENST00000525665 RSF1Q96T23 1441 aaPredicted RBP27.57■■■□□ 2
PSMD13-204ENST00000525665 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.99
PSMD13-204ENST00000525665 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
PSMD13-204ENST00000525665 ATAD2BQ9ULI0 1458 aa27.45■■□□□ 1.98
PSMD13-204ENST00000525665 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
PSMD13-204ENST00000525665 WIZO95785 1651 aa27.41■■□□□ 1.98
PSMD13-204ENST00000525665 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
PSMD13-204ENST00000525665 NCAPD3P42695 1498 aa27.33■■□□□ 1.97
PSMD13-204ENST00000525665 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
PSMD13-204ENST00000525665 HMGXB3Q12766 1538 aa27.26■■□□□ 1.95
PSMD13-204ENST00000525665 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
PSMD13-204ENST00000525665 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
PSMD13-204ENST00000525665 CADPSQ9ULU8 1353 aa26.6■■□□□ 1.85
PSMD13-204ENST00000525665 CFTRP13569 1480 aa26.54■■□□□ 1.84
PSMD13-204ENST00000525665 NESP48681 1621 aa26.53■■□□□ 1.84
PSMD13-204ENST00000525665 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
PSMD13-204ENST00000525665 PDS5BQ9NTI5 1447 aa26.37■■□□□ 1.81
PSMD13-204ENST00000525665 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
PSMD13-204ENST00000525665 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
PSMD13-204ENST00000525665 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
PSMD13-204ENST00000525665 CEP164Q9UPV0 1460 aa26.22■■□□□ 1.79
PSMD13-204ENST00000525665 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
PSMD13-204ENST00000525665 MRC2Q9UBG0 1479 aa26.06■■□□□ 1.76
PSMD13-204ENST00000525665 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
PSMD13-204ENST00000525665 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
PSMD13-204ENST00000525665 THOC2Q8NI27 1593 aaKnown RBP25.98■■□□□ 1.75
PSMD13-204ENST00000525665 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
PSMD13-204ENST00000525665 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.74
PSMD13-204ENST00000525665 CUX1P39880 1505 aa25.94■■□□□ 1.74
PSMD13-204ENST00000525665 TOPBP1Q92547 1522 aa25.93■■□□□ 1.74
PSMD13-204ENST00000525665 WDR62O43379 1518 aa25.92■■□□□ 1.74
PSMD13-204ENST00000525665 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
PSMD13-204ENST00000525665 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
PSMD13-204ENST00000525665 BIVM-ERCC5R4GMW8 1640 aa25.83■■□□□ 1.73
PSMD13-204ENST00000525665 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
PSMD13-204ENST00000525665 TRIM41Q8WV44 630 aa25.81■■□□□ 1.72
PSMD13-204ENST00000525665 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
PSMD13-204ENST00000525665 POLA1P09884 1462 aaPredicted RBP25.75■■□□□ 1.71
PSMD13-204ENST00000525665 CUX2O14529 1486 aa25.74■■□□□ 1.71
PSMD13-204ENST00000525665 SOGA1O94964 1423 aa25.67■■□□□ 1.7
PSMD13-204ENST00000525665 RAD54L2Q9Y4B4 1467 aa25.64■■□□□ 1.7
PSMD13-204ENST00000525665 IFT140Q96RY7 1462 aa25.64■■□□□ 1.69
PSMD13-204ENST00000525665 TARBP1Q13395 1621 aaKnown RBP25.57■■□□□ 1.68
PSMD13-204ENST00000525665 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
PSMD13-204ENST00000525665 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
PSMD13-204ENST00000525665 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
PSMD13-204ENST00000525665 TDRD9Q8NDG6 1382 aaKnown RBP25.46■■□□□ 1.67
PSMD13-204ENST00000525665 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
PSMD13-204ENST00000525665 AQRO60306 1485 aaKnown RBP eCLIP25.41■■□□□ 1.662e-6■■■■□ 24.1
PSMD13-204ENST00000525665 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.65
PSMD13-204ENST00000525665 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
PSMD13-204ENST00000525665 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
PSMD13-204ENST00000525665 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.65
PSMD13-204ENST00000525665 GRIN2BQ13224 1484 aa25.3■■□□□ 1.64
PSMD13-204ENST00000525665 EEA1Q15075 1411 aa25.29■■□□□ 1.64
PSMD13-204ENST00000525665 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
PSMD13-204ENST00000525665 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
PSMD13-204ENST00000525665 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
PSMD13-204ENST00000525665 IGF1RP08069 1367 aa25.22■■□□□ 1.63
PSMD13-204ENST00000525665 SNAPC4Q5SXM2 1469 aa25.2■■□□□ 1.62
PSMD13-204ENST00000525665 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
PSMD13-204ENST00000525665 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
PSMD13-204ENST00000525665 CUL7Q14999 1698 aa25.12■■□□□ 1.61
PSMD13-204ENST00000525665 CARMIL1Q5VZK9 1371 aa25.12■■□□□ 1.61
PSMD13-204ENST00000525665 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
PSMD13-204ENST00000525665 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
PSMD13-204ENST00000525665 FBLN2P98095 1184 aa25.06■■□□□ 1.6
PSMD13-204ENST00000525665 SYNJ2O15056 1496 aa25.06■■□□□ 1.6
PSMD13-204ENST00000525665 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
PSMD13-204ENST00000525665 PRXQ9BXM0 1461 aa25.04■■□□□ 1.6
PSMD13-204ENST00000525665 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
PSMD13-204ENST00000525665 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
PSMD13-204ENST00000525665 KIF21BO75037 1637 aa24.96■■□□□ 1.59
PSMD13-204ENST00000525665 CHD1O14646 1710 aa24.95■■□□□ 1.59
PSMD13-204ENST00000525665 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
PSMD13-204ENST00000525665 GOLGA3Q08378 1498 aa24.9■■□□□ 1.58
PSMD13-204ENST00000525665 UBTFP17480 764 aaKnown RBP24.83■■□□□ 1.57
PSMD13-204ENST00000525665 NUP160Q12769 1436 aa24.82■■□□□ 1.56
PSMD13-204ENST00000525665 OSCARQ8IYS5 282 aa24.81■■□□□ 1.56
PSMD13-204ENST00000525665 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms