RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-209ENST00000529372 NISCHQ9Y2I1 1504 aa31.09■■■□□ 2.57
PSMD13-209ENST00000529372 ABCC9O60706 1549 aa29.25■■■□□ 2.27
PSMD13-209ENST00000529372 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
PSMD13-209ENST00000529372 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
PSMD13-209ENST00000529372 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
PSMD13-209ENST00000529372 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
PSMD13-209ENST00000529372 NACADO15069 1562 aa26.97■■□□□ 1.91
PSMD13-209ENST00000529372 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
PSMD13-209ENST00000529372 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
PSMD13-209ENST00000529372 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
PSMD13-209ENST00000529372 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
PSMD13-209ENST00000529372 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
PSMD13-209ENST00000529372 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
PSMD13-209ENST00000529372 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
PSMD13-209ENST00000529372 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
PSMD13-209ENST00000529372 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
PSMD13-209ENST00000529372 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
PSMD13-209ENST00000529372 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
PSMD13-209ENST00000529372 CUX2O14529 1486 aa25.6■■□□□ 1.69
PSMD13-209ENST00000529372 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
PSMD13-209ENST00000529372 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
PSMD13-209ENST00000529372 TRIM41Q8WV44 630 aa25.05■■□□□ 1.6
PSMD13-209ENST00000529372 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
PSMD13-209ENST00000529372 NESP48681 1621 aa24.9■■□□□ 1.58
PSMD13-209ENST00000529372 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
PSMD13-209ENST00000529372 ATAD2BQ9ULI0 1458 aa24.75■■□□□ 1.55
PSMD13-209ENST00000529372 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
PSMD13-209ENST00000529372 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
PSMD13-209ENST00000529372 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
PSMD13-209ENST00000529372 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
PSMD13-209ENST00000529372 SMARCA4P51532 1647 aa24.45■■□□□ 1.5
PSMD13-209ENST00000529372 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
PSMD13-209ENST00000529372 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
PSMD13-209ENST00000529372 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.48
PSMD13-209ENST00000529372 WDR62O43379 1518 aa24.27■■□□□ 1.48
PSMD13-209ENST00000529372 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
PSMD13-209ENST00000529372 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
PSMD13-209ENST00000529372 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
PSMD13-209ENST00000529372 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
PSMD13-209ENST00000529372 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
PSMD13-209ENST00000529372 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
PSMD13-209ENST00000529372 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
PSMD13-209ENST00000529372 MROH2BQ7Z745 1585 aa23.97■■□□□ 1.43
PSMD13-209ENST00000529372 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
PSMD13-209ENST00000529372 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
PSMD13-209ENST00000529372 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
PSMD13-209ENST00000529372 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
PSMD13-209ENST00000529372 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
PSMD13-209ENST00000529372 TRHP20396 242 aaPredicted RBP23.69■■□□□ 1.38
PSMD13-209ENST00000529372 CFTRP13569 1480 aa23.68■■□□□ 1.38
PSMD13-209ENST00000529372 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
PSMD13-209ENST00000529372 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
PSMD13-209ENST00000529372 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
PSMD13-209ENST00000529372 WIZO95785 1651 aa23.6■■□□□ 1.37
PSMD13-209ENST00000529372 IFT140Q96RY7 1462 aa23.5■■□□□ 1.35
PSMD13-209ENST00000529372 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
PSMD13-209ENST00000529372 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
PSMD13-209ENST00000529372 CHD1O14646 1710 aa23.4■■□□□ 1.34
PSMD13-209ENST00000529372 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
PSMD13-209ENST00000529372 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
PSMD13-209ENST00000529372 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.312e-6■■■■□ 25.7
PSMD13-209ENST00000529372 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
PSMD13-209ENST00000529372 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
PSMD13-209ENST00000529372 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
PSMD13-209ENST00000529372 FBLN2P98095 1184 aa23.16■■□□□ 1.3
PSMD13-209ENST00000529372 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
PSMD13-209ENST00000529372 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
PSMD13-209ENST00000529372 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
PSMD13-209ENST00000529372 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
PSMD13-209ENST00000529372 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
PSMD13-209ENST00000529372 ILDR1Q86SU0 546 aaPredicted RBP22.97■■□□□ 1.27
PSMD13-209ENST00000529372 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
PSMD13-209ENST00000529372 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
PSMD13-209ENST00000529372 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
PSMD13-209ENST00000529372 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
PSMD13-209ENST00000529372 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
PSMD13-209ENST00000529372 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
PSMD13-209ENST00000529372 SOGA1O94964 1423 aa22.82■■□□□ 1.24
PSMD13-209ENST00000529372 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
PSMD13-209ENST00000529372 SYNJ2O15056 1496 aa22.81■■□□□ 1.24
PSMD13-209ENST00000529372 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
PSMD13-209ENST00000529372 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
PSMD13-209ENST00000529372 KIF13AQ9H1H9 1805 aa22.73■■□□□ 1.23
PSMD13-209ENST00000529372 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
PSMD13-209ENST00000529372 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
PSMD13-209ENST00000529372 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
PSMD13-209ENST00000529372 CEP170Q5SW79 1584 aa22.58■■□□□ 1.2
PSMD13-209ENST00000529372 CUX1P39880 1505 aa22.57■■□□□ 1.2
PSMD13-209ENST00000529372 SHROOM2Q13796 1616 aa22.51■■□□□ 1.19
PSMD13-209ENST00000529372 NUP160Q12769 1436 aa22.49■■□□□ 1.19
PSMD13-209ENST00000529372 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
PSMD13-209ENST00000529372 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
PSMD13-209ENST00000529372 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
PSMD13-209ENST00000529372 FAM69CQ0P6D2 419 aa22.42■■□□□ 1.18
PSMD13-209ENST00000529372 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
PSMD13-209ENST00000529372 DIP2BQ9P265 1576 aa22.4■■□□□ 1.18
PSMD13-209ENST00000529372 KDM6BO15054 1643 aa22.39■■□□□ 1.18
PSMD13-209ENST00000529372 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
PSMD13-209ENST00000529372 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
PSMD13-209ENST00000529372 PRG4Q92954 1404 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms