RNA–Protein interactions for RNA: ENST00000382671.8

PSMD13-202, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,489 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-202ENST00000382671 NISCHQ9Y2I1 1504 aa38.52■■■■□ 3.76
PSMD13-202ENST00000382671 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
PSMD13-202ENST00000382671 ABCC9O60706 1549 aa33.51■■■□□ 2.96
PSMD13-202ENST00000382671 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
PSMD13-202ENST00000382671 NACADO15069 1562 aa32.24■■■□□ 2.75
PSMD13-202ENST00000382671 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
PSMD13-202ENST00000382671 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
PSMD13-202ENST00000382671 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
PSMD13-202ENST00000382671 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
PSMD13-202ENST00000382671 UNC13AQ9UPW8 1703 aa31.65■■■□□ 2.66
PSMD13-202ENST00000382671 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
PSMD13-202ENST00000382671 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
PSMD13-202ENST00000382671 SCRIBQ14160 1630 aa31.25■■■□□ 2.59
PSMD13-202ENST00000382671 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
PSMD13-202ENST00000382671 DNAJC5BQ9UF47 199 aa30.77■■■□□ 2.52
PSMD13-202ENST00000382671 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
PSMD13-202ENST00000382671 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
PSMD13-202ENST00000382671 CECR2Q9BXF3 1484 aa30.13■■■□□ 2.41
PSMD13-202ENST00000382671 SMARCA4P51532 1647 aa29.92■■■□□ 2.38
PSMD13-202ENST00000382671 BAZ1AQ9NRL2 1556 aaPredicted RBP29.87■■■□□ 2.37
PSMD13-202ENST00000382671 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
PSMD13-202ENST00000382671 ATAD2BQ9ULI0 1458 aa29.72■■■□□ 2.35
PSMD13-202ENST00000382671 SMARCA2P51531 1590 aa29.72■■■□□ 2.35
PSMD13-202ENST00000382671 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
PSMD13-202ENST00000382671 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
PSMD13-202ENST00000382671 HMGXB3Q12766 1538 aa29.6■■■□□ 2.33
PSMD13-202ENST00000382671 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
PSMD13-202ENST00000382671 WIZO95785 1651 aa29.39■■■□□ 2.29
PSMD13-202ENST00000382671 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
PSMD13-202ENST00000382671 TOP2AP11388 1531 aaKnown RBP29.05■■■□□ 2.24
PSMD13-202ENST00000382671 NESP48681 1621 aa29■■■□□ 2.23
PSMD13-202ENST00000382671 LAMC3Q9Y6N6 1575 aa28.98■■■□□ 2.23
PSMD13-202ENST00000382671 ERCC6Q03468 1493 aa28.89■■■□□ 2.21
PSMD13-202ENST00000382671 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
PSMD13-202ENST00000382671 KIF21AQ7Z4S6 1674 aa28.74■■■□□ 2.19
PSMD13-202ENST00000382671 PDS5BQ9NTI5 1447 aa28.74■■■□□ 2.19
PSMD13-202ENST00000382671 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
PSMD13-202ENST00000382671 CFTRP13569 1480 aa28.68■■■□□ 2.18
PSMD13-202ENST00000382671 CUX2O14529 1486 aa28.63■■■□□ 2.17
PSMD13-202ENST00000382671 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
PSMD13-202ENST00000382671 PRDM2Q13029 1718 aa28.58■■■□□ 2.17
PSMD13-202ENST00000382671 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.16
PSMD13-202ENST00000382671 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
PSMD13-202ENST00000382671 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
PSMD13-202ENST00000382671 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.15
PSMD13-202ENST00000382671 WDR62O43379 1518 aa28.38■■■□□ 2.13
PSMD13-202ENST00000382671 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
PSMD13-202ENST00000382671 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
PSMD13-202ENST00000382671 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
PSMD13-202ENST00000382671 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
PSMD13-202ENST00000382671 IFT140Q96RY7 1462 aa27.89■■■□□ 2.06
PSMD13-202ENST00000382671 CUX1P39880 1505 aa27.84■■■□□ 2.05
PSMD13-202ENST00000382671 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
PSMD13-202ENST00000382671 TARBP1Q13395 1621 aaKnown RBP27.8■■■□□ 2.04
PSMD13-202ENST00000382671 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
PSMD13-202ENST00000382671 ZNF608Q9ULD9 1512 aaPredicted RBP27.75■■■□□ 2.03
PSMD13-202ENST00000382671 FGD5Q6ZNL6 1462 aa27.74■■■□□ 2.03
PSMD13-202ENST00000382671 SOGA1O94964 1423 aa27.69■■■□□ 2.02
PSMD13-202ENST00000382671 EIF4G3O43432 1585 aaKnown RBP27.68■■■□□ 2.02
PSMD13-202ENST00000382671 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
PSMD13-202ENST00000382671 BIVM-ERCC5R4GMW8 1640 aa27.64■■■□□ 2.02
PSMD13-202ENST00000382671 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
PSMD13-202ENST00000382671 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
PSMD13-202ENST00000382671 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
PSMD13-202ENST00000382671 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
PSMD13-202ENST00000382671 AQRO60306 1485 aaKnown RBP eCLIP27.59■■■□□ 2.012e-6■■■■□ 24.1
PSMD13-202ENST00000382671 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
PSMD13-202ENST00000382671 ABCA10Q8WWZ4 1543 aa27.49■■□□□ 1.99
PSMD13-202ENST00000382671 ABCA5Q8WWZ7 1642 aa27.41■■□□□ 1.98
PSMD13-202ENST00000382671 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
PSMD13-202ENST00000382671 OSCARQ8IYS5 282 aa27.4■■□□□ 1.98
PSMD13-202ENST00000382671 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
PSMD13-202ENST00000382671 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
PSMD13-202ENST00000382671 CHD1O14646 1710 aa27.38■■□□□ 1.97
PSMD13-202ENST00000382671 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
PSMD13-202ENST00000382671 MAGI1Q96QZ7 1491 aaPredicted RBP27.33■■□□□ 1.97
PSMD13-202ENST00000382671 FBLN2P98095 1184 aa27.22■■□□□ 1.95
PSMD13-202ENST00000382671 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
PSMD13-202ENST00000382671 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
PSMD13-202ENST00000382671 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
PSMD13-202ENST00000382671 ADAMTS12P58397 1594 aa27.14■■□□□ 1.93
PSMD13-202ENST00000382671 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
PSMD13-202ENST00000382671 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
PSMD13-202ENST00000382671 CLASP1Q7Z460 1538 aa27.04■■□□□ 1.92
PSMD13-202ENST00000382671 GRIN2AQ12879 1464 aa27.03■■□□□ 1.92
PSMD13-202ENST00000382671 RIMBP3CA6NJZ7 1639 aa27.02■■□□□ 1.92
PSMD13-202ENST00000382671 RIMBP3BA6NNM3 1639 aa27.02■■□□□ 1.92
PSMD13-202ENST00000382671 RIMBP3Q9UFD9 1639 aa27.02■■□□□ 1.92
PSMD13-202ENST00000382671 ARHGEF11O15085 1522 aa26.99■■□□□ 1.91
PSMD13-202ENST00000382671 CUL7Q14999 1698 aa26.95■■□□□ 1.9
PSMD13-202ENST00000382671 IGF1RP08069 1367 aa26.95■■□□□ 1.9
PSMD13-202ENST00000382671 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
PSMD13-202ENST00000382671 NUP160Q12769 1436 aa26.91■■□□□ 1.9
PSMD13-202ENST00000382671 CEP170Q5SW79 1584 aa26.91■■□□□ 1.9
PSMD13-202ENST00000382671 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
PSMD13-202ENST00000382671 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
PSMD13-202ENST00000382671 SHROOM2Q13796 1616 aa26.77■■□□□ 1.88
PSMD13-202ENST00000382671 ARAP1Q96P48 1450 aa26.76■■□□□ 1.88
PSMD13-202ENST00000382671 CYB5RLQ6IPT4 315 aa26.68■■□□□ 1.86
PSMD13-202ENST00000382671 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms