Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.02■■□□□ 1.28
UPF2Q9HAU5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.02■■□□□ 1.28
UPF2Q9HAU5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF2Q9HAU5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC23.02■■□□□ 1.28
UPF2Q9HAU5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
UPF2Q9HAU5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.02■■□□□ 1.28
UPF2Q9HAU5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF2Q9HAU5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
UPF2Q9HAU5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
UPF2Q9HAU5 AC092368.3-202ENST00000574180 1591 ntBASIC23.01■■□□□ 1.27
UPF2Q9HAU5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.01■■□□□ 1.27
UPF2Q9HAU5 AC067852.2-201ENST00000590513 2313 ntBASIC23■■□□□ 1.27
UPF2Q9HAU5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC23■■□□□ 1.27
UPF2Q9HAU5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23■■□□□ 1.27
UPF2Q9HAU5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23■■□□□ 1.27
UPF2Q9HAU5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
UPF2Q9HAU5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
UPF2Q9HAU5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23■■□□□ 1.27
UPF2Q9HAU5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23■■□□□ 1.27
UPF2Q9HAU5 AL121829.2-201ENST00000620908 328 ntBASIC23■■□□□ 1.27
UPF2Q9HAU5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC23■■□□□ 1.27
UPF2Q9HAU5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
UPF2Q9HAU5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
UPF2Q9HAU5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
UPF2Q9HAU5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
UPF2Q9HAU5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC23■■□□□ 1.27
UPF2Q9HAU5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 MIPEPP3-201ENST00000412105 444 ntBASIC22.99■■□□□ 1.27
UPF2Q9HAU5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.99■■□□□ 1.27
UPF2Q9HAU5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 AL050303.2-201ENST00000619798 666 ntBASIC22.98■■□□□ 1.27
UPF2Q9HAU5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC22.98■■□□□ 1.27
UPF2Q9HAU5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms