Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 HNRNPLL-201ENST00000272249 2190 ntTSL 27.85□□□□□ -1.151e-6■□□□□ 9.6
LSM11P83369 AC008443.1-205ENST00000599439 1868 nt7.78□□□□□ -1.161e-6■□□□□ 9.6
LSM11P83369 HNRNPLL-208ENST00000441689 512 ntTSL 37.31□□□□□ -1.241e-6■□□□□ 9.6
LSM11P83369 SMYD3-215ENST00000490322 368 ntTSL 35.46□□□□□ -1.541e-6■□□□□ 9.6
LSM11P83369 SLC39A10-205ENST00000430412 4478 ntTSL 25.01□□□□□ -1.611e-6■□□□□ 9.6
LSM11P83369 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.931e-6■□□□□ 9.6
LSM11P83369 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.961e-6■□□□□ 9.6
LSM11P83369 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.346e-10■□□□□ 9.6
LSM11P83369 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.84e-8■□□□□ 9.6
LSM11P83369 PLXNB1-214ENST00000478171 576 ntTSL 314.13□□□□□ -0.153e-8■□□□□ 9.6
LSM11P83369 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.652e-11■□□□□ 9.6
LSM11P83369 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.91■■□□□ 1.582e-11■□□□□ 9.6
LSM11P83369 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.065e-14■□□□□ 9.6
LSM11P83369 DCAF11-215ENST00000558914 2342 ntTSL 214.89□□□□□ -0.035e-14■□□□□ 9.6
LSM11P83369 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.45e-14■□□□□ 9.6
LSM11P83369 DCAF11-212ENST00000558624 2627 ntTSL 212.01□□□□□ -0.495e-14■□□□□ 9.6
LSM11P83369 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.515e-14■□□□□ 9.6
LSM11P83369 DCAF11-201ENST00000326009 2570 ntTSL 1 (best)11.69□□□□□ -0.545e-14■□□□□ 9.6
LSM11P83369 DCAF11-205ENST00000557802 4202 ntTSL 1 (best)11.62□□□□□ -0.555e-14■□□□□ 9.6
LSM11P83369 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC11.42□□□□□ -0.585e-14■□□□□ 9.6
LSM11P83369 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC10.58□□□□□ -0.725e-14■□□□□ 9.6
LSM11P83369 HDAC10-217ENST00000496235 885 ntTSL 517.33■□□□□ 0.363e-6■□□□□ 9.6
LSM11P83369 HDAC10-220ENST00000497952 976 ntTSL 59.41□□□□□ -0.93e-6■□□□□ 9.6
LSM11P83369 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.383e-9■□□□□ 9.6
LSM11P83369 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.13e-9■□□□□ 9.6
LSM11P83369 ACADVL-225ENST00000581378 752 ntTSL 314.79□□□□□ -0.043e-9■□□□□ 9.6
LSM11P83369 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.493e-9■□□□□ 9.6
LSM11P83369 UBP1-212ENST00000492136 7394 ntTSL 26.15□□□□□ -1.433e-9■□□□□ 9.6
LSM11P83369 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.224e-7■□□□□ 9.5
LSM11P83369 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.464e-7■□□□□ 9.5
LSM11P83369 NIPA1-203ENST00000557930 582 ntTSL 211.88□□□□□ -0.514e-7■□□□□ 9.5
LSM11P83369 NIPA1-205ENST00000560069 575 ntTSL 410.56□□□□□ -0.724e-7■□□□□ 9.5
LSM11P83369 NIPA1-204ENST00000559448 2799 ntTSL 210.02□□□□□ -0.814e-7■□□□□ 9.5
LSM11P83369 NIPA1-206ENST00000560105 375 ntTSL 28.67□□□□□ -1.024e-7■□□□□ 9.5
LSM11P83369 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.24e-7■□□□□ 9.5
LSM11P83369 LAMB2-217ENST00000498377 1021 ntTSL 215□□□□□ -0.019e-9■□□□□ 9.5
LSM11P83369 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.49e-9■□□□□ 9.5
LSM11P83369 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.469e-9■□□□□ 9.5
LSM11P83369 LAMB2-205ENST00000467506 689 ntTSL 211.75□□□□□ -0.539e-9■□□□□ 9.5
LSM11P83369 C19orf48-203ENST00000593287 578 ntTSL 512.27□□□□□ -0.458e-7■□□□□ 9.5
LSM11P83369 C19orf48-212ENST00000600373 709 ntTSL 212□□□□□ -0.498e-7■□□□□ 9.5
LSM11P83369 C19orf48-206ENST00000596554 727 ntTSL 311.38□□□□□ -0.598e-7■□□□□ 9.5
LSM11P83369 C19orf48-208ENST00000597493 971 ntTSL 210.79□□□□□ -0.688e-7■□□□□ 9.5
LSM11P83369 C19orf48-213ENST00000601267 782 ntTSL 210.78□□□□□ -0.688e-7■□□□□ 9.5
LSM11P83369 C19orf48-211ENST00000599004 866 ntTSL 510.57□□□□□ -0.728e-7■□□□□ 9.5
LSM11P83369 C19orf48-204ENST00000595794 941 ntTSL 1 (best)9.98□□□□□ -0.818e-7■□□□□ 9.5
LSM11P83369 CNOT2-206ENST00000547780 582 ntTSL 519.32■□□□□ 0.684e-9■□□□□ 9.5
LSM11P83369 CNOT2-227ENST00000551043 2288 ntTSL 218■□□□□ 0.474e-9■□□□□ 9.5
LSM11P83369 CNOT2-236ENST00000552231 1545 ntTSL 215.5■□□□□ 0.074e-9■□□□□ 9.5
LSM11P83369 CNOT2-209ENST00000548159 2549 ntTSL 1 (best)15.27■□□□□ 0.044e-9■□□□□ 9.5
LSM11P83369 CNOT2-241ENST00000552915 1071 ntTSL 515.27■□□□□ 0.044e-9■□□□□ 9.5
LSM11P83369 CNOT2-220ENST00000549750 1085 ntTSL 511.85□□□□□ -0.514e-9■□□□□ 9.5
LSM11P83369 CNOT2-238ENST00000552422 443 ntTSL 311.16□□□□□ -0.624e-9■□□□□ 9.5
LSM11P83369 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.654e-9■□□□□ 9.5
LSM11P83369 CNOT2-229ENST00000551179 355 ntTSL 210.8□□□□□ -0.684e-9■□□□□ 9.5
LSM11P83369 CNOT2-223ENST00000550160 993 ntTSL 510.67□□□□□ -0.74e-9■□□□□ 9.5
LSM11P83369 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.814e-9■□□□□ 9.5
LSM11P83369 CNOT2-217ENST00000549443 457 ntTSL 49.67□□□□□ -0.864e-9■□□□□ 9.5
LSM11P83369 CNOT2-239ENST00000552483 895 ntTSL 59.62□□□□□ -0.874e-9■□□□□ 9.5
LSM11P83369 CNOT2-205ENST00000547321 577 ntTSL 29.4□□□□□ -0.94e-9■□□□□ 9.5
LSM11P83369 CNOT2-228ENST00000551132 618 ntTSL 39.4□□□□□ -0.94e-9■□□□□ 9.5
LSM11P83369 CNOT2-242ENST00000553020 576 ntTSL 59.4□□□□□ -0.94e-9■□□□□ 9.5
LSM11P83369 CNOT2-243ENST00000553078 440 ntTSL 39.4□□□□□ -0.94e-9■□□□□ 9.5
LSM11P83369 CNOT2-232ENST00000551661 571 ntTSL 48.57□□□□□ -1.044e-9■□□□□ 9.5
LSM11P83369 CNOT2-208ENST00000548021 724 ntTSL 28.12□□□□□ -1.114e-9■□□□□ 9.5
LSM11P83369 CNOT2-214ENST00000548741 536 ntTSL 47.93□□□□□ -1.144e-9■□□□□ 9.5
LSM11P83369 CNOT2-225ENST00000550641 964 ntTSL 57.93□□□□□ -1.144e-9■□□□□ 9.5
LSM11P83369 CNOT2-237ENST00000552319 783 ntTSL 57.42□□□□□ -1.224e-9■□□□□ 9.5
LSM11P83369 TMEM94-202ENST00000375248 4703 ntTSL 2 BASIC9.51□□□□□ -0.895e-11■□□□□ 9.5
LSM11P83369 ACADVL-230ENST00000582379 833 ntTSL 38.11□□□□□ -1.112e-7■□□□□ 9.5
LSM11P83369 WDR6-219ENST00000498023 626 ntTSL 212.93□□□□□ -0.349e-8■□□□□ 9.5
LSM11P83369 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.752e-26■□□□□ 9.5
LSM11P83369 DDX39B-218ENST00000478365 439 ntTSL 27□□□□□ -1.291e-12■□□□□ 9.5
LSM11P83369 PCF11-203ENST00000530304 2649 ntTSL 1 (best)18.41■□□□□ 0.543e-12■□□□□ 9.5
LSM11P83369 PCF11-207ENST00000624931 1720 nt16.22■□□□□ 0.193e-12■□□□□ 9.5
LSM11P83369 PCF11-206ENST00000533018 580 ntTSL 315.5■□□□□ 0.073e-12■□□□□ 9.5
LSM11P83369 PCF11-204ENST00000530660 3309 ntTSL 213.29□□□□□ -0.283e-12■□□□□ 9.5
LSM11P83369 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.643e-12■□□□□ 9.5
LSM11P83369 CTAGE5-209ENST00000553383 1010 ntTSL 212.49□□□□□ -0.412e-7■□□□□ 9.5
LSM11P83369 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC11.52□□□□□ -0.562e-7■□□□□ 9.5
LSM11P83369 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC10.89□□□□□ -0.672e-7■□□□□ 9.5
LSM11P83369 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC9.84□□□□□ -0.832e-7■□□□□ 9.5
LSM11P83369 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC9.5□□□□□ -0.892e-7■□□□□ 9.5
LSM11P83369 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC8.71□□□□□ -1.012e-7■□□□□ 9.5
LSM11P83369 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.37□□□□□ -1.552e-7■□□□□ 9.5
LSM11P83369 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.28□□□□□ -1.562e-7■□□□□ 9.5
LSM11P83369 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.1□□□□□ -1.592e-7■□□□□ 9.5
LSM11P83369 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.612e-7■□□□□ 9.5
LSM11P83369 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.622e-7■□□□□ 9.5
LSM11P83369 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.672e-7■□□□□ 9.5
LSM11P83369 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.113e-68■□□□□ 9.5
LSM11P83369 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.233e-68■□□□□ 9.5
LSM11P83369 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.483e-68■□□□□ 9.5
LSM11P83369 SCFD1-216ENST00000555550 541 ntTSL 412.56□□□□□ -0.45e-7■□□□□ 9.5
LSM11P83369 HMBOX1-209ENST00000522468 817 ntTSL 312.22□□□□□ -0.454e-13■□□□□ 9.5
LSM11P83369 RNF220-213ENST00000480686 3835 ntTSL 211.87□□□□□ -0.515e-7■□□□□ 9.5
LSM11P83369 RNF220-211ENST00000474956 3303 ntTSL 211.78□□□□□ -0.525e-7■□□□□ 9.5
LSM11P83369 RBM5-219ENST00000475590 704 ntTSL 211.24□□□□□ -0.612e-6■□□□□ 9.5
LSM11P83369 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.371e-14■□□□□ 9.5
LSM11P83369 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.21e-14■□□□□ 9.5
Retrieved 100 of 11,495 protein–RNA pairs in 61.1 ms