RNA–Protein interactions for RNA: ENST00000496235.5

HDAC10-217, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-217ENST00000496235 NISCHQ9Y2I1 1504 aa49.23■■■■■ 5.47
HDAC10-217ENST00000496235 CCDC180Q9P1Z9 1646 aa43.99■■■■■ 4.63
HDAC10-217ENST00000496235 ABCC9O60706 1549 aa43.47■■■■■ 4.55
HDAC10-217ENST00000496235 RB1CC1Q8TDY2 1594 aa41.58■■■■■ 4.25
HDAC10-217ENST00000496235 DCAF8L2P0C7V8 631 aa41.41■■■■■ 4.22
HDAC10-217ENST00000496235 NACADO15069 1562 aa41.39■■■■■ 4.22
HDAC10-217ENST00000496235 MYO15BQ96JP2 1530 aa40.92■■■■■ 4.14
HDAC10-217ENST00000496235 ZCCHC6Q5VYS8 1495 aaKnown RBP40.9■■■■■ 4.14
HDAC10-217ENST00000496235 UNC13AQ9UPW8 1703 aa40.83■■■■■ 4.13
HDAC10-217ENST00000496235 DCAF1Q9Y4B6 1507 aa40.62■■■■■ 4.09
HDAC10-217ENST00000496235 PABPN1Q86U42 306 aaKnown RBP eCLIP40.55■■■■■ 4.081e-7■□□□□ 10.8
HDAC10-217ENST00000496235 BICRAQ9NZM4 1560 aa40.37■■■■■ 4.05
HDAC10-217ENST00000496235 DNAJC5BQ9UF47 199 aa40.24■■■■■ 4.03
HDAC10-217ENST00000496235 SCRIBQ14160 1630 aa40.18■■■■■ 4.02
HDAC10-217ENST00000496235 SHROOM4Q9ULL8 1493 aa39.73■■■■□ 3.95
HDAC10-217ENST00000496235 EIF4G1Q04637 1599 aaKnown RBP39.32■■■■□ 3.88
HDAC10-217ENST00000496235 CC2D2AQ9P2K1 1620 aa39.3■■■■□ 3.88
HDAC10-217ENST00000496235 CECR2Q9BXF3 1484 aa39.05■■■■□ 3.84
HDAC10-217ENST00000496235 SMARCA4P51532 1647 aa38.34■■■■□ 3.73
HDAC10-217ENST00000496235 BAZ1AQ9NRL2 1556 aaPredicted RBP38.18■■■■□ 3.7
HDAC10-217ENST00000496235 ATAD2BQ9ULI0 1458 aa38.16■■■■□ 3.7
HDAC10-217ENST00000496235 NCAPD3P42695 1498 aa38.15■■■■□ 3.7
HDAC10-217ENST00000496235 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
HDAC10-217ENST00000496235 MROH2BQ7Z745 1585 aa37.98■■■■□ 3.67
HDAC10-217ENST00000496235 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
HDAC10-217ENST00000496235 PEG3Q9GZU2 1588 aa37.88■■■■□ 3.65
HDAC10-217ENST00000496235 BAZ1BQ9UIG0 1483 aaKnown RBP37.86■■■■□ 3.65
HDAC10-217ENST00000496235 WIZO95785 1651 aa37.63■■■■□ 3.62
HDAC10-217ENST00000496235 NESP48681 1621 aa37.51■■■■□ 3.6
HDAC10-217ENST00000496235 ERCC6Q03468 1493 aa37.46■■■■□ 3.59
HDAC10-217ENST00000496235 RSF1Q96T23 1441 aaPredicted RBP37.35■■■■□ 3.57
HDAC10-217ENST00000496235 LAMC3Q9Y6N6 1575 aa37.29■■■■□ 3.56
HDAC10-217ENST00000496235 CUX2O14529 1486 aa37.14■■■■□ 3.54
HDAC10-217ENST00000496235 KIF21AQ7Z4S6 1674 aa37.14■■■■□ 3.54
HDAC10-217ENST00000496235 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
HDAC10-217ENST00000496235 CADPSQ9ULU8 1353 aa37.04■■■■□ 3.52
HDAC10-217ENST00000496235 THOC2Q8NI27 1593 aaKnown RBP37.01■■■■□ 3.52
HDAC10-217ENST00000496235 PDS5BQ9NTI5 1447 aa37.01■■■■□ 3.51
HDAC10-217ENST00000496235 CFTRP13569 1480 aa36.74■■■■□ 3.47
HDAC10-217ENST00000496235 MRC2Q9UBG0 1479 aa36.69■■■■□ 3.46
HDAC10-217ENST00000496235 CCDC88BA6NC98 1476 aa36.67■■■■□ 3.46
HDAC10-217ENST00000496235 FANCD2Q9BXW9 1451 aa36.67■■■■□ 3.46
HDAC10-217ENST00000496235 CEP164Q9UPV0 1460 aa36.67■■■■□ 3.46
HDAC10-217ENST00000496235 PRDM2Q13029 1718 aa36.63■■■■□ 3.45
HDAC10-217ENST00000496235 WDR62O43379 1518 aa36.57■■■■□ 3.44
HDAC10-217ENST00000496235 DNAJC5Q9H3Z4 198 aa36.49■■■■□ 3.43
HDAC10-217ENST00000496235 URB2Q14146 1524 aaKnown RBP36.35■■■■□ 3.41
HDAC10-217ENST00000496235 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
HDAC10-217ENST00000496235 TOPBP1Q92547 1522 aa36.05■■■■□ 3.36
HDAC10-217ENST00000496235 DNMBPQ6XZF7 1577 aa35.98■■■■□ 3.35
HDAC10-217ENST00000496235 ABCC8Q09428 1581 aa35.95■■■■□ 3.35
HDAC10-217ENST00000496235 IFT140Q96RY7 1462 aa35.87■■■■□ 3.33
HDAC10-217ENST00000496235 ZNF608Q9ULD9 1512 aaPredicted RBP35.83■■■■□ 3.33
HDAC10-217ENST00000496235 TARBP1Q13395 1621 aaKnown RBP35.72■■■■□ 3.31
HDAC10-217ENST00000496235 POLA1P09884 1462 aaPredicted RBP35.71■■■■□ 3.31
HDAC10-217ENST00000496235 EIF4G3O43432 1585 aaKnown RBP35.69■■■■□ 3.3
HDAC10-217ENST00000496235 CUX1P39880 1505 aa35.65■■■■□ 3.3
HDAC10-217ENST00000496235 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
HDAC10-217ENST00000496235 FGD5Q6ZNL6 1462 aa35.59■■■■□ 3.29
HDAC10-217ENST00000496235 AQRO60306 1485 aaKnown RBP eCLIP35.56■■■■□ 3.285e-7■■■□□ 15.8
HDAC10-217ENST00000496235 OSCARQ8IYS5 282 aa35.55■■■■□ 3.28
HDAC10-217ENST00000496235 SOGA1O94964 1423 aa35.55■■■■□ 3.28
HDAC10-217ENST00000496235 TDRD9Q8NDG6 1382 aaKnown RBP35.42■■■■□ 3.26
HDAC10-217ENST00000496235 CHD1O14646 1710 aa35.42■■■■□ 3.26
HDAC10-217ENST00000496235 WDR97A6NE52 1622 aa35.37■■■■□ 3.25
HDAC10-217ENST00000496235 BIVM-ERCC5R4GMW8 1640 aa35.26■■■■□ 3.24
HDAC10-217ENST00000496235 FBLN2P98095 1184 aa35.25■■■■□ 3.23
HDAC10-217ENST00000496235 TRIM41Q8WV44 630 aa35.24■■■■□ 3.23
HDAC10-217ENST00000496235 SYNJ1O43426 1573 aa35.24■■■■□ 3.23
HDAC10-217ENST00000496235 TOP2BQ02880 1626 aa35.23■■■■□ 3.23
HDAC10-217ENST00000496235 PBRM1Q86U86 1689 aa35.23■■■■□ 3.23
HDAC10-217ENST00000496235 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
HDAC10-217ENST00000496235 SNAPC4Q5SXM2 1469 aa35.22■■■■□ 3.23
HDAC10-217ENST00000496235 ABCA10Q8WWZ4 1543 aa35.16■■■■□ 3.22
HDAC10-217ENST00000496235 GRIN2BQ13224 1484 aa35.16■■■■□ 3.22
HDAC10-217ENST00000496235 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
HDAC10-217ENST00000496235 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
HDAC10-217ENST00000496235 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
HDAC10-217ENST00000496235 GAPVD1Q14C86 1478 aa35.14■■■■□ 3.22
HDAC10-217ENST00000496235 ABCA5Q8WWZ7 1642 aa35.13■■■■□ 3.21
HDAC10-217ENST00000496235 MAGI1Q96QZ7 1491 aaPredicted RBP35.1■■■■□ 3.21
HDAC10-217ENST00000496235 CHMP7Q8WUX9 453 aaPredicted RBP35.03■■■■□ 3.2
HDAC10-217ENST00000496235 ARHGEF11O15085 1522 aa35.01■■■■□ 3.2
HDAC10-217ENST00000496235 SYNJ2O15056 1496 aa34.98■■■■□ 3.19
HDAC10-217ENST00000496235 CLASP1Q7Z460 1538 aa34.87■■■■□ 3.17
HDAC10-217ENST00000496235 ADAMTS12P58397 1594 aa34.83■■■■□ 3.17
HDAC10-217ENST00000496235 CYB5RLQ6IPT4 315 aa34.74■■■■□ 3.15
HDAC10-217ENST00000496235 ERICH3Q5RHP9 1530 aa34.74■■■■□ 3.15
HDAC10-217ENST00000496235 GRIN2AQ12879 1464 aa34.73■■■■□ 3.15
HDAC10-217ENST00000496235 ARAP1Q96P48 1450 aa34.72■■■■□ 3.15
HDAC10-217ENST00000496235 FHAD1B1AJZ9 1412 aa34.68■■■■□ 3.14
HDAC10-217ENST00000496235 CEP170Q5SW79 1584 aa34.63■■■■□ 3.13
HDAC10-217ENST00000496235 NUP160Q12769 1436 aa34.55■■■■□ 3.12
HDAC10-217ENST00000496235 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
HDAC10-217ENST00000496235 ERCC6L2Q5T890 1561 aa34.45■■■■□ 3.11
HDAC10-217ENST00000496235 CUL7Q14999 1698 aa34.41■■■■□ 3.1
HDAC10-217ENST00000496235 IGF1RP08069 1367 aa34.41■■■■□ 3.1
HDAC10-217ENST00000496235 SHROOM2Q13796 1616 aa34.41■■■■□ 3.1
HDAC10-217ENST00000496235 RUSC2Q8N2Y8 1516 aa34.32■■■■□ 3.08
HDAC10-217ENST00000496235 JPH4Q96JJ6 628 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms