Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHGB3Q9Y5G1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDHGB3Q9Y5G1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDHGB3Q9Y5G1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGB3Q9Y5G1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGB3Q9Y5G1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHGB3Q9Y5G1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB3Q9Y5G1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB3Q9Y5G1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB3Q9Y5G1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB3Q9Y5G1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.71■■□□□ 1.39
PCDHGB3Q9Y5G1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHGB3Q9Y5G1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB3Q9Y5G1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHGB3Q9Y5G1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 HLA-V-202ENST00000446817 847 ntBASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 WHAMMP2-203ENST00000563942 1603 ntBASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB3Q9Y5G1 LINC01003-201ENST00000564834 1764 ntBASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB3Q9Y5G1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGB3Q9Y5G1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHGB3Q9Y5G1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PCDHGB3Q9Y5G1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB3Q9Y5G1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB3Q9Y5G1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHGB3Q9Y5G1 LINC01971-201ENST00000617888 1048 ntBASIC23.66■■□□□ 1.38
PCDHGB3Q9Y5G1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB3Q9Y5G1 AP002414.2-202ENST00000590929 1450 ntBASIC23.66■■□□□ 1.38
PCDHGB3Q9Y5G1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHGB3Q9Y5G1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGB3Q9Y5G1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGB3Q9Y5G1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.64■■□□□ 1.38
PCDHGB3Q9Y5G1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
PCDHGB3Q9Y5G1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHGB3Q9Y5G1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHGB3Q9Y5G1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGB3Q9Y5G1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGB3Q9Y5G1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.63■■□□□ 1.37
PCDHGB3Q9Y5G1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGB3Q9Y5G1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB3Q9Y5G1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PCDHGB3Q9Y5G1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGB3Q9Y5G1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGB3Q9Y5G1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB3Q9Y5G1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB3Q9Y5G1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB3Q9Y5G1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDHGB3Q9Y5G1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB3Q9Y5G1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
PCDHGB3Q9Y5G1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PCDHGB3Q9Y5G1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGB3Q9Y5G1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGB3Q9Y5G1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGB3Q9Y5G1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB3Q9Y5G1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGB3Q9Y5G1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB3Q9Y5G1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGB3Q9Y5G1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGB3Q9Y5G1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 DUX4L11-201ENST00000611504 1267 ntBASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 DUX4L12-201ENST00000614593 1267 ntBASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 DUX4L14-201ENST00000621227 1267 ntBASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB3Q9Y5G1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 MIR639-201ENST00000384974 98 ntBASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGB3Q9Y5G1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB3Q9Y5G1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGB3Q9Y5G1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB3Q9Y5G1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB3Q9Y5G1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGB3Q9Y5G1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 MIR3648-2-201ENST00000581792 180 ntBASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 MIR3648-1-201ENST00000615959 180 ntBASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGB3Q9Y5G1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms