Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00479Q96M42 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LINC00479Q96M42 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LINC00479Q96M42 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00479Q96M42 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00479Q96M42 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC00479Q96M42 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00479Q96M42 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.13■□□□□ 0.65
LINC00479Q96M42 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00479Q96M42 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC00479Q96M42 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC00479Q96M42 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.12■□□□□ 0.65
LINC00479Q96M42 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00479Q96M42 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00479Q96M42 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC00479Q96M42 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC00479Q96M42 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00479Q96M42 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00479Q96M42 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LINC00479Q96M42 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC00479Q96M42 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00479Q96M42 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LINC00479Q96M42 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LINC00479Q96M42 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.1■□□□□ 0.65
LINC00479Q96M42 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00479Q96M42 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00479Q96M42 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC00479Q96M42 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00479Q96M42 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00479Q96M42 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00479Q96M42 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00479Q96M42 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00479Q96M42 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00479Q96M42 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00479Q96M42 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00479Q96M42 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00479Q96M42 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC00479Q96M42 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00479Q96M42 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00479Q96M42 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00479Q96M42 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00479Q96M42 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00479Q96M42 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00479Q96M42 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00479Q96M42 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00479Q96M42 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00479Q96M42 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LINC00479Q96M42 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00479Q96M42 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00479Q96M42 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00479Q96M42 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00479Q96M42 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00479Q96M42 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00479Q96M42 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00479Q96M42 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00479Q96M42 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00479Q96M42 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00479Q96M42 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00479Q96M42 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00479Q96M42 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.04■□□□□ 0.64
LINC00479Q96M42 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.04■□□□□ 0.64
LINC00479Q96M42 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC00479Q96M42 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00479Q96M42 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.03■□□□□ 0.64
LINC00479Q96M42 AC018358.1-201ENST00000631079 1402 ntBASIC19.03■□□□□ 0.64
LINC00479Q96M42 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00479Q96M42 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LINC00479Q96M42 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LINC00479Q96M42 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC00479Q96M42 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LINC00479Q96M42 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00479Q96M42 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00479Q96M42 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.02■□□□□ 0.63
LINC00479Q96M42 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINC00479Q96M42 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINC00479Q96M42 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LINC00479Q96M42 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC00479Q96M42 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00479Q96M42 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC00479Q96M42 AC093323.1-202ENST00000635031 2045 ntBASIC19■□□□□ 0.63
LINC00479Q96M42 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LINC00479Q96M42 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00479Q96M42 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00479Q96M42 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
LINC00479Q96M42 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC00479Q96M42 SETD8P1-201ENST00000623146 1180 ntBASIC18.99■□□□□ 0.63
LINC00479Q96M42 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC00479Q96M42 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00479Q96M42 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00479Q96M42 RARRES2P7-201ENST00000567349 469 ntBASIC18.98■□□□□ 0.63
LINC00479Q96M42 AC092803.2-201ENST00000564287 1899 ntBASIC18.98■□□□□ 0.63
LINC00479Q96M42 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC00479Q96M42 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00479Q96M42 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LINC00479Q96M42 DUSP8P4-201ENST00000399538 1761 ntBASIC18.97■□□□□ 0.63
LINC00479Q96M42 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00479Q96M42 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC00479Q96M42 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00479Q96M42 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC00479Q96M42 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms