Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM65Q6PJ69 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM65Q6PJ69 LINC01003-201ENST00000564834 1764 ntBASIC27.61■■■□□ 2.01
TRIM65Q6PJ69 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
TRIM65Q6PJ69 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRIM65Q6PJ69 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRIM65Q6PJ69 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRIM65Q6PJ69 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
TRIM65Q6PJ69 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TRIM65Q6PJ69 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
TRIM65Q6PJ69 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TRIM65Q6PJ69 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.57■■■□□ 2
TRIM65Q6PJ69 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
TRIM65Q6PJ69 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.56■■■□□ 2
TRIM65Q6PJ69 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TRIM65Q6PJ69 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIM65Q6PJ69 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIM65Q6PJ69 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIM65Q6PJ69 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TRIM65Q6PJ69 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
TRIM65Q6PJ69 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.54■■■□□ 2
TRIM65Q6PJ69 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.54■■■□□ 2
TRIM65Q6PJ69 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.53■■■□□ 2
TRIM65Q6PJ69 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM65Q6PJ69 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.53■■■□□ 2
TRIM65Q6PJ69 AP002414.2-202ENST00000590929 1450 ntBASIC27.53■■■□□ 2
TRIM65Q6PJ69 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.53■■■□□ 2
TRIM65Q6PJ69 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.53■■■□□ 2
TRIM65Q6PJ69 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.53■■■□□ 2
TRIM65Q6PJ69 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM65Q6PJ69 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
TRIM65Q6PJ69 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.52■■■□□ 2
TRIM65Q6PJ69 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.52■■■□□ 2
TRIM65Q6PJ69 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
TRIM65Q6PJ69 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TRIM65Q6PJ69 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM65Q6PJ69 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.5■■□□□ 1.99
TRIM65Q6PJ69 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM65Q6PJ69 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM65Q6PJ69 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM65Q6PJ69 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.49■■□□□ 1.99
TRIM65Q6PJ69 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TRIM65Q6PJ69 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.48■■□□□ 1.99
TRIM65Q6PJ69 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.48■■□□□ 1.99
TRIM65Q6PJ69 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TRIM65Q6PJ69 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TRIM65Q6PJ69 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM65Q6PJ69 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM65Q6PJ69 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.47■■□□□ 1.99
TRIM65Q6PJ69 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM65Q6PJ69 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM65Q6PJ69 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM65Q6PJ69 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.47■■□□□ 1.99
TRIM65Q6PJ69 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM65Q6PJ69 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM65Q6PJ69 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM65Q6PJ69 RPS2P35-201ENST00000443417 897 ntBASIC27.46■■□□□ 1.99
TRIM65Q6PJ69 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TRIM65Q6PJ69 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
TRIM65Q6PJ69 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 AC021231.2-201ENST00000594613 730 ntBASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM65Q6PJ69 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM65Q6PJ69 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM65Q6PJ69 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM65Q6PJ69 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.43■■□□□ 1.98
TRIM65Q6PJ69 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM65Q6PJ69 AC091060.1-201ENST00000623524 1766 ntBASIC27.43■■□□□ 1.98
TRIM65Q6PJ69 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM65Q6PJ69 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.42■■□□□ 1.98
TRIM65Q6PJ69 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM65Q6PJ69 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM65Q6PJ69 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM65Q6PJ69 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM65Q6PJ69 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
TRIM65Q6PJ69 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM65Q6PJ69 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM65Q6PJ69 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.41■■□□□ 1.98
TRIM65Q6PJ69 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM65Q6PJ69 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM65Q6PJ69 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM65Q6PJ69 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
TRIM65Q6PJ69 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.39■■□□□ 1.98
TRIM65Q6PJ69 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM65Q6PJ69 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM65Q6PJ69 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
TRIM65Q6PJ69 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM65Q6PJ69 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
TRIM65Q6PJ69 DUX4L29-201ENST00000425409 679 ntBASIC27.38■■□□□ 1.97
TRIM65Q6PJ69 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.38■■□□□ 1.97
TRIM65Q6PJ69 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM65Q6PJ69 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TRIM65Q6PJ69 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM65Q6PJ69 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.36■■□□□ 1.97
TRIM65Q6PJ69 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms