Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CD74P04233 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD74P04233 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD74P04233 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD74P04233 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD74P04233 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CD74P04233 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD74P04233 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD74P04233 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.16■□□□□ 0.98
CD74P04233 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.16■□□□□ 0.98
CD74P04233 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.16■□□□□ 0.98
CD74P04233 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
CD74P04233 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD74P04233 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD74P04233 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD74P04233 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.15■□□□□ 0.98
CD74P04233 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CD74P04233 AC093323.1-202ENST00000635031 2045 ntBASIC21.15■□□□□ 0.98
CD74P04233 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CD74P04233 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.15■□□□□ 0.98
CD74P04233 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD74P04233 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.15■□□□□ 0.98
CD74P04233 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD74P04233 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD74P04233 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.14■□□□□ 0.97
CD74P04233 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD74P04233 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.14■□□□□ 0.97
CD74P04233 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.13■□□□□ 0.97
CD74P04233 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD74P04233 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD74P04233 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CD74P04233 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD74P04233 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.12■□□□□ 0.97
CD74P04233 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD74P04233 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD74P04233 AC092803.2-201ENST00000564287 1899 ntBASIC21.12■□□□□ 0.97
CD74P04233 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD74P04233 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.12■□□□□ 0.97
CD74P04233 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD74P04233 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD74P04233 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD74P04233 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.11■□□□□ 0.97
CD74P04233 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.11■□□□□ 0.97
CD74P04233 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.11■□□□□ 0.97
CD74P04233 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CD74P04233 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.1■□□□□ 0.97
CD74P04233 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CD74P04233 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.1■□□□□ 0.97
CD74P04233 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD74P04233 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.09■□□□□ 0.97
CD74P04233 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD74P04233 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD74P04233 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.09■□□□□ 0.97
CD74P04233 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD74P04233 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.09■□□□□ 0.97
CD74P04233 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CD74P04233 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD74P04233 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD74P04233 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.08■□□□□ 0.96
CD74P04233 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CD74P04233 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CD74P04233 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CD74P04233 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD74P04233 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.06■□□□□ 0.96
CD74P04233 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CD74P04233 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CD74P04233 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CD74P04233 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD74P04233 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.05■□□□□ 0.96
CD74P04233 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD74P04233 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CD74P04233 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD74P04233 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD74P04233 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CD74P04233 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CD74P04233 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CD74P04233 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD74P04233 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.03■□□□□ 0.96
CD74P04233 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD74P04233 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD74P04233 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD74P04233 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.02■□□□□ 0.96
CD74P04233 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD74P04233 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD74P04233 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.01■□□□□ 0.95
CD74P04233 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD74P04233 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD74P04233 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD74P04233 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD74P04233 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD74P04233 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.99■□□□□ 0.95
CD74P04233 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD74P04233 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD74P04233 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD74P04233 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD74P04233 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD74P04233 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD74P04233 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.98■□□□□ 0.95
CD74P04233 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CD74P04233 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms