Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDEFO95238 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.06■□□□□ 0.96
SPDEFO95238 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDEFO95238 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDEFO95238 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.05■□□□□ 0.96
SPDEFO95238 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
SPDEFO95238 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPDEFO95238 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPDEFO95238 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SPDEFO95238 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDEFO95238 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDEFO95238 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.04■□□□□ 0.96
SPDEFO95238 AC091060.1-201ENST00000623524 1766 ntBASIC21.04■□□□□ 0.96
SPDEFO95238 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SPDEFO95238 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDEFO95238 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SPDEFO95238 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 MIR762-201ENST00000390236 83 ntBASIC21.03■□□□□ 0.96
SPDEFO95238 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.03■□□□□ 0.96
SPDEFO95238 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SPDEFO95238 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.03■□□□□ 0.96
SPDEFO95238 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.02■□□□□ 0.96
SPDEFO95238 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.02■□□□□ 0.96
SPDEFO95238 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SPDEFO95238 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SPDEFO95238 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDEFO95238 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.01■□□□□ 0.95
SPDEFO95238 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21■□□□□ 0.95
SPDEFO95238 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21■□□□□ 0.95
SPDEFO95238 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.98■□□□□ 0.95
SPDEFO95238 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SPDEFO95238 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.97■□□□□ 0.95
SPDEFO95238 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.97■□□□□ 0.95
SPDEFO95238 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDEFO95238 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDEFO95238 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SPDEFO95238 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDEFO95238 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 AC005559.1-201ENST00000589661 871 ntBASIC20.95■□□□□ 0.94
SPDEFO95238 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDEFO95238 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDEFO95238 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDEFO95238 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDEFO95238 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDEFO95238 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SPDEFO95238 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDEFO95238 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDEFO95238 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDEFO95238 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SPDEFO95238 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SPDEFO95238 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDEFO95238 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPDEFO95238 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SPDEFO95238 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDEFO95238 LINC01003-201ENST00000564834 1764 ntBASIC20.9■□□□□ 0.94
SPDEFO95238 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.89■□□□□ 0.94
SPDEFO95238 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms