Protein–RNA interactions for Protein: A0A1B0GTU2

CTXND1, Cortexin domain-containing 1, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTXND1A0A1B0GTU2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CTXND1A0A1B0GTU2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTXND1A0A1B0GTU2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTXND1A0A1B0GTU2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTXND1A0A1B0GTU2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CTXND1A0A1B0GTU2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTXND1A0A1B0GTU2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTXND1A0A1B0GTU2 DUSP8P4-201ENST00000399538 1761 ntBASIC19.72■□□□□ 0.75
CTXND1A0A1B0GTU2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTXND1A0A1B0GTU2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTXND1A0A1B0GTU2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CTXND1A0A1B0GTU2 AL133380.1-201ENST00000506013 324 ntBASIC19.71■□□□□ 0.75
CTXND1A0A1B0GTU2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
CTXND1A0A1B0GTU2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTXND1A0A1B0GTU2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTXND1A0A1B0GTU2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CTXND1A0A1B0GTU2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTXND1A0A1B0GTU2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTXND1A0A1B0GTU2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTXND1A0A1B0GTU2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTXND1A0A1B0GTU2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTXND1A0A1B0GTU2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTXND1A0A1B0GTU2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTXND1A0A1B0GTU2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.67■□□□□ 0.74
CTXND1A0A1B0GTU2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTXND1A0A1B0GTU2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
CTXND1A0A1B0GTU2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTXND1A0A1B0GTU2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.67■□□□□ 0.74
CTXND1A0A1B0GTU2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTXND1A0A1B0GTU2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 AC018358.1-201ENST00000631079 1402 ntBASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTXND1A0A1B0GTU2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 AC092803.2-201ENST00000564287 1899 ntBASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTXND1A0A1B0GTU2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CTXND1A0A1B0GTU2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CTXND1A0A1B0GTU2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTXND1A0A1B0GTU2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.64■□□□□ 0.73
CTXND1A0A1B0GTU2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTXND1A0A1B0GTU2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTXND1A0A1B0GTU2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CTXND1A0A1B0GTU2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTXND1A0A1B0GTU2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTXND1A0A1B0GTU2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.62■□□□□ 0.73
CTXND1A0A1B0GTU2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTXND1A0A1B0GTU2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTXND1A0A1B0GTU2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTXND1A0A1B0GTU2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTXND1A0A1B0GTU2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTXND1A0A1B0GTU2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTXND1A0A1B0GTU2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTXND1A0A1B0GTU2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTXND1A0A1B0GTU2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTXND1A0A1B0GTU2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.59■□□□□ 0.73
CTXND1A0A1B0GTU2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.59■□□□□ 0.73
CTXND1A0A1B0GTU2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTXND1A0A1B0GTU2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTXND1A0A1B0GTU2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTXND1A0A1B0GTU2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.58■□□□□ 0.73
CTXND1A0A1B0GTU2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CTXND1A0A1B0GTU2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.58■□□□□ 0.72
CTXND1A0A1B0GTU2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTXND1A0A1B0GTU2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTXND1A0A1B0GTU2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTXND1A0A1B0GTU2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTXND1A0A1B0GTU2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.56■□□□□ 0.72
CTXND1A0A1B0GTU2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTXND1A0A1B0GTU2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTXND1A0A1B0GTU2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.56■□□□□ 0.72
CTXND1A0A1B0GTU2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTXND1A0A1B0GTU2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTXND1A0A1B0GTU2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTXND1A0A1B0GTU2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms