Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IGKV2-28A0A075B6P5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IGKV2-28A0A075B6P5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.52■□□□□ 0.24
IGKV2-28A0A075B6P5 AC093323.1-202ENST00000635031 2045 ntBASIC16.52■□□□□ 0.24
IGKV2-28A0A075B6P5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.52■□□□□ 0.24
IGKV2-28A0A075B6P5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IGKV2-28A0A075B6P5 SETD8P1-201ENST00000623146 1180 ntBASIC16.52■□□□□ 0.24
IGKV2-28A0A075B6P5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IGKV2-28A0A075B6P5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGKV2-28A0A075B6P5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGKV2-28A0A075B6P5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.51■□□□□ 0.23
IGKV2-28A0A075B6P5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.51■□□□□ 0.23
IGKV2-28A0A075B6P5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV2-28A0A075B6P5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV2-28A0A075B6P5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
IGKV2-28A0A075B6P5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
IGKV2-28A0A075B6P5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV2-28A0A075B6P5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.5■□□□□ 0.23
IGKV2-28A0A075B6P5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
IGKV2-28A0A075B6P5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV2-28A0A075B6P5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
IGKV2-28A0A075B6P5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV2-28A0A075B6P5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV2-28A0A075B6P5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV2-28A0A075B6P5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV2-28A0A075B6P5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV2-28A0A075B6P5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV2-28A0A075B6P5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.46■□□□□ 0.23
IGKV2-28A0A075B6P5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.46■□□□□ 0.23
IGKV2-28A0A075B6P5 AC100797.4-201ENST00000631653 1827 ntBASIC16.46■□□□□ 0.23
IGKV2-28A0A075B6P5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV2-28A0A075B6P5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV2-28A0A075B6P5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
IGKV2-28A0A075B6P5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV2-28A0A075B6P5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV2-28A0A075B6P5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV2-28A0A075B6P5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV2-28A0A075B6P5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV2-28A0A075B6P5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV2-28A0A075B6P5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.43■□□□□ 0.22
IGKV2-28A0A075B6P5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV2-28A0A075B6P5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV2-28A0A075B6P5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV2-28A0A075B6P5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV2-28A0A075B6P5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV2-28A0A075B6P5 AC127502.1-201ENST00000399971 1502 ntBASIC16.42■□□□□ 0.22
IGKV2-28A0A075B6P5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV2-28A0A075B6P5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV2-28A0A075B6P5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV2-28A0A075B6P5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV2-28A0A075B6P5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV2-28A0A075B6P5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.41■□□□□ 0.22
IGKV2-28A0A075B6P5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
IGKV2-28A0A075B6P5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV2-28A0A075B6P5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IGKV2-28A0A075B6P5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.4■□□□□ 0.22
IGKV2-28A0A075B6P5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV2-28A0A075B6P5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV2-28A0A075B6P5 AP002414.2-202ENST00000590929 1450 ntBASIC16.4■□□□□ 0.22
IGKV2-28A0A075B6P5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV2-28A0A075B6P5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV2-28A0A075B6P5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.39■□□□□ 0.22
IGKV2-28A0A075B6P5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IGKV2-28A0A075B6P5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IGKV2-28A0A075B6P5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGKV2-28A0A075B6P5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.39■□□□□ 0.21
IGKV2-28A0A075B6P5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IGKV2-28A0A075B6P5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.39■□□□□ 0.21
IGKV2-28A0A075B6P5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IGKV2-28A0A075B6P5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
IGKV2-28A0A075B6P5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IGKV2-28A0A075B6P5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.38■□□□□ 0.21
IGKV2-28A0A075B6P5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IGKV2-28A0A075B6P5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IGKV2-28A0A075B6P5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IGKV2-28A0A075B6P5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IGKV2-28A0A075B6P5 DUSP8P4-201ENST00000399538 1761 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms