Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
IGKV2-28A0A075B6P5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
IGKV2-28A0A075B6P5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC21.96■■□□□ 1.11
IGKV2-28A0A075B6P5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IGKV2-28A0A075B6P5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
IGKV2-28A0A075B6P5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV2-28A0A075B6P5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV2-28A0A075B6P5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.3■■□□□ 1
IGKV2-28A0A075B6P5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.09■□□□□ 0.97
IGKV2-28A0A075B6P5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.09■□□□□ 0.97
IGKV2-28A0A075B6P5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGKV2-28A0A075B6P5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
IGKV2-28A0A075B6P5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.03■□□□□ 0.96
IGKV2-28A0A075B6P5 AL356512.1-201ENST00000607453 1739 ntBASIC20.97■□□□□ 0.95
IGKV2-28A0A075B6P5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
IGKV2-28A0A075B6P5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV2-28A0A075B6P5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
IGKV2-28A0A075B6P5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.78■□□□□ 0.92
IGKV2-28A0A075B6P5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
IGKV2-28A0A075B6P5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
IGKV2-28A0A075B6P5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV2-28A0A075B6P5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IGKV2-28A0A075B6P5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV2-28A0A075B6P5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV2-28A0A075B6P5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV2-28A0A075B6P5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
IGKV2-28A0A075B6P5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV2-28A0A075B6P5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
IGKV2-28A0A075B6P5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IGKV2-28A0A075B6P5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGKV2-28A0A075B6P5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGKV2-28A0A075B6P5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGKV2-28A0A075B6P5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV2-28A0A075B6P5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
IGKV2-28A0A075B6P5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IGKV2-28A0A075B6P5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV2-28A0A075B6P5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV2-28A0A075B6P5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
IGKV2-28A0A075B6P5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
IGKV2-28A0A075B6P5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGKV2-28A0A075B6P5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IGKV2-28A0A075B6P5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV2-28A0A075B6P5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
IGKV2-28A0A075B6P5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
IGKV2-28A0A075B6P5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IGKV2-28A0A075B6P5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IGKV2-28A0A075B6P5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.72■□□□□ 0.75
IGKV2-28A0A075B6P5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.7■□□□□ 0.74
IGKV2-28A0A075B6P5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IGKV2-28A0A075B6P5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
IGKV2-28A0A075B6P5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGKV2-28A0A075B6P5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
IGKV2-28A0A075B6P5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
IGKV2-28A0A075B6P5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV2-28A0A075B6P5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV2-28A0A075B6P5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.55■□□□□ 0.72
IGKV2-28A0A075B6P5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV2-28A0A075B6P5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV2-28A0A075B6P5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.45■□□□□ 0.7
IGKV2-28A0A075B6P5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV2-28A0A075B6P5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV2-28A0A075B6P5 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV2-28A0A075B6P5 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV2-28A0A075B6P5 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
IGKV2-28A0A075B6P5 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.4■□□□□ 0.7
IGKV2-28A0A075B6P5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV2-28A0A075B6P5 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV2-28A0A075B6P5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.34■□□□□ 0.69
IGKV2-28A0A075B6P5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.34■□□□□ 0.69
IGKV2-28A0A075B6P5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IGKV2-28A0A075B6P5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.34■□□□□ 0.69
IGKV2-28A0A075B6P5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IGKV2-28A0A075B6P5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
IGKV2-28A0A075B6P5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.29■□□□□ 0.68
IGKV2-28A0A075B6P5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV2-28A0A075B6P5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV2-28A0A075B6P5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGKV2-28A0A075B6P5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
IGKV2-28A0A075B6P5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IGKV2-28A0A075B6P5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
IGKV2-28A0A075B6P5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.25■□□□□ 0.67
IGKV2-28A0A075B6P5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV2-28A0A075B6P5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.24■□□□□ 0.67
IGKV2-28A0A075B6P5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
IGKV2-28A0A075B6P5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGKV2-28A0A075B6P5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGKV2-28A0A075B6P5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGKV2-28A0A075B6P5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IGKV2-28A0A075B6P5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.19■□□□□ 0.66
IGKV2-28A0A075B6P5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.18■□□□□ 0.66
IGKV2-28A0A075B6P5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGKV2-28A0A075B6P5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IGKV2-28A0A075B6P5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
IGKV2-28A0A075B6P5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.14■□□□□ 0.65
IGKV2-28A0A075B6P5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
IGKV2-28A0A075B6P5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.13■□□□□ 0.65
IGKV2-28A0A075B6P5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV2-28A0A075B6P5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGKV2-28A0A075B6P5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGKV2-28A0A075B6P5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms