RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 FAP1P53971 965 aa7.47□□□□□ -1.21
snR50snR50 PRY3P47033 881 aa7.12□□□□□ -1.27
snR50snR50 YCK3P39962 524 aa6.93□□□□□ -1.3
snR50snR50 HAA1Q12753 694 aaKnown RBP6.62□□□□□ -1.35
snR50snR50 MTC1P47018 478 aaKnown RBP6.56□□□□□ -1.36
snR50snR50 AAD16Q02895 342 aa6.5□□□□□ -1.37
snR50snR50 PRI1P10363 409 aa6.4□□□□□ -1.38
snR50snR50 BUD31P25337 157 aaPredicted RBP6.08□□□□□ -1.44
snR50snR50 TSR3Q12094 313 aaKnown RBP5.93□□□□□ -1.46
snR50snR50 YGL015CP33199 130 aa5.85□□□□□ -1.47
snR50snR50 RPG1P38249 964 aaKnown RBP5.72□□□□□ -1.49
snR50snR50 ISW2Q08773 1120 aa5.68□□□□□ -1.5
snR50snR50 MRPL32P25348 183 aa5.64□□□□□ -1.51
snR50snR50 SIS1P25294 352 aaKnown RBP5.55□□□□□ -1.52
snR50snR50 CDC27P38042 758 aa5.22□□□□□ -1.57
snR50snR50 UBP9P39967 754 aa5.21□□□□□ -1.58
snR50snR50 UBP10P53874 792 aaPredicted RBP5.2□□□□□ -1.58
snR50snR50 MAP2P38174 421 aaKnown RBP5.18□□□□□ -1.58
snR50snR50 TGL3P40308 642 aa5□□□□□ -1.61
snR50snR50 TIF4632P39936 914 aaKnown RBP4.91□□□□□ -1.62
snR50snR50 YKR023WP36119 530 aaKnown RBP4.85□□□□□ -1.63
snR50snR50 RGA2Q06407 1009 aa4.82□□□□□ -1.64
snR50snR50 RSE1Q04693 1361 aaKnown RBP4.81□□□□□ -1.64
snR50snR50 REB1P21538 810 aa4.81□□□□□ -1.64
snR50snR50 SLX5P32828 619 aaKnown RBP4.78□□□□□ -1.64
snR50snR50 SCY1P53009 804 aa4.77□□□□□ -1.65
snR50snR50 YBL029C-AQ3E756 94 aa4.77□□□□□ -1.65
snR50snR50 RPL17AP05740 184 aaKnown RBP4.76□□□□□ -1.65
snR50snR50 RPL17BP46990 184 aaKnown RBP4.76□□□□□ -1.65
snR50snR50 AIR2Q12476 344 aaKnown RBP4.74□□□□□ -1.65
snR50snR50 DCD1P06773 312 aa4.72□□□□□ -1.65
snR50snR50 TFC8Q12308 588 aa4.71□□□□□ -1.66
snR50snR50 MST1P07236 462 aa4.69□□□□□ -1.66
snR50snR50 HOP09932 586 aa4.68□□□□□ -1.66
snR50snR50 VNX1P42839 908 aa4.68□□□□□ -1.66
snR50snR50 FKH1P40466 484 aa4.65□□□□□ -1.67
snR50snR50 YJL171CP46992 396 aa4.62□□□□□ -1.67
snR50snR50 SPT21P35209 758 aa4.56□□□□□ -1.68
snR50snR50 DIP2Q12220 943 aaPredicted RBP4.56□□□□□ -1.68
snR50snR50 DRS1P32892 752 aaKnown RBP4.55□□□□□ -1.68
snR50snR50 SPP1Q03012 353 aa4.55□□□□□ -1.68
snR50snR50 BCH2P36122 765 aa4.5□□□□□ -1.69
snR50snR50 YOR238WQ08634 303 aa4.48□□□□□ -1.69
snR50snR50 BMT6Q12291 365 aa4.48□□□□□ -1.69
snR50snR50 TIF11P38912 153 aaKnown RBP4.44□□□□□ -1.7
snR50snR50 RGA1P39083 1007 aa4.41□□□□□ -1.7
snR50snR50 WSC3Q12215 556 aa4.41□□□□□ -1.7
snR50snR50 IOC2Q12072 812 aa4.38□□□□□ -1.71
snR50snR50 LDB19Q12502 818 aa4.38□□□□□ -1.71
snR50snR50 NSR1P27476 414 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
snR50snR50 BDF1P35817 686 aa4.29□□□□□ -1.72
snR50snR50 ULI1P43604 169 aa4.27□□□□□ -1.73
snR50snR50 EPS1P40557 701 aa4.25□□□□□ -1.73
snR50snR50 BCK2P33306 851 aa4.24□□□□□ -1.73
snR50snR50 YAP5P40574 245 aa4.23□□□□□ -1.73
snR50snR50 RTG1P32607 177 aa4.15□□□□□ -1.75
snR50snR50 NCR1Q12200 1170 aa4.15□□□□□ -1.75
snR50snR50 GTT3P39996 337 aa4.11□□□□□ -1.75
snR50snR50 SRC1Q03707 834 aa4.09□□□□□ -1.75
snR50snR50 CHL1P22516 861 aaPredicted RBP4.07□□□□□ -1.76
snR50snR50 SEC61P32915 480 aa4.07□□□□□ -1.76
snR50snR50 XDJ1P39102 459 aa4.07□□□□□ -1.76
snR50snR50 AVT3P36062 692 aa4.06□□□□□ -1.76
snR50snR50 RIM101P33400 625 aa4.05□□□□□ -1.76
snR50snR50 TRP5P00931 707 aaKnown RBP4.04□□□□□ -1.76
snR50snR50 YNL035CP53962 389 aaKnown RBP4.04□□□□□ -1.76
snR50snR50 MSB4Q12317 492 aa4.04□□□□□ -1.76
snR50snR50 EAP1P36041 632 aaKnown RBP4.03□□□□□ -1.76
snR50snR50 DPS1P04802 557 aaKnown RBP4.02□□□□□ -1.77
snR50snR50 PRE3P38624 215 aa4.01□□□□□ -1.77
snR50snR50 SAP30P38429 201 aa4□□□□□ -1.77
snR50snR50 VRP1P37370 817 aa3.96□□□□□ -1.78
snR50snR50 PIB1Q06651 286 aa3.95□□□□□ -1.78
snR50snR50 YOL036WQ08206 761 aa3.95□□□□□ -1.78
snR50snR50 SET4P42948 560 aa3.93□□□□□ -1.78
snR50snR50 DAN4P47179 1161 aa3.93□□□□□ -1.78
snR50snR50 YDL129WQ07555 291 aa3.91□□□□□ -1.78
snR50snR50 OXP1P28273 1286 aa3.89□□□□□ -1.79
snR50snR50 YDR344CQ05510 147 aa3.89□□□□□ -1.79
snR50snR50 TFG1P41895 735 aaPredicted RBP3.88□□□□□ -1.79
snR50snR50 YPL062WQ02781 134 aa3.83□□□□□ -1.8
snR50snR50 BBC1P47068 1157 aa3.81□□□□□ -1.8
snR50snR50 JIP4Q03361 876 aa3.8□□□□□ -1.8
snR50snR50 AI2P03876 854 aa3.79□□□□□ -1.8
snR50snR50 SAM3Q08986 587 aa3.77□□□□□ -1.81
snR50snR50 PTP3P40048 928 aa3.73□□□□□ -1.81
snR50snR50 VMA1P17255 1071 aaKnown RBP3.7□□□□□ -1.82
snR50snR50 RSM7P47150 247 aa3.7□□□□□ -1.82
snR50snR50 RAS1P01119 309 aa3.68□□□□□ -1.82
snR50snR50 PTC4P38089 393 aa3.68□□□□□ -1.82
snR50snR50 ELP4Q02884 456 aaKnown RBP3.68□□□□□ -1.82
snR50snR50 YIL055CP40523 627 aaKnown RBP3.66□□□□□ -1.82
snR50snR50 ARH1P48360 493 aa3.64□□□□□ -1.83
snR50snR50 YEL023CP39992 682 aa3.63□□□□□ -1.83
snR50snR50 DBP1P24784 617 aaKnown RBP3.62□□□□□ -1.83
snR50snR50 TRK1P12685 1235 aa3.61□□□□□ -1.83
snR50snR50 ABP1P15891 592 aaKnown RBP3.61□□□□□ -1.83
snR50snR50 VPS29P38759 282 aa3.6□□□□□ -1.83
snR50snR50 YFR006WP43590 535 aa3.6□□□□□ -1.83
snR50snR50 HTA1P04911 132 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms