RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 FAP1P53971 965 aa6.5□□□□□ -1.37
snR47snR47 PRY3P47033 881 aa6.17□□□□□ -1.42
snR47snR47 MTC1P47018 478 aaKnown RBP6.07□□□□□ -1.44
snR47snR47 YCK3P39962 524 aa5.9□□□□□ -1.46
snR47snR47 HAA1Q12753 694 aaKnown RBP5.8□□□□□ -1.48
snR47snR47 AAD16Q02895 342 aa5.77□□□□□ -1.49
snR47snR47 PRI1P10363 409 aa5.7□□□□□ -1.5
snR47snR47 TSR3Q12094 313 aaKnown RBP5.27□□□□□ -1.57
snR47snR47 BUD31P25337 157 aaPredicted RBP5.23□□□□□ -1.57
snR47snR47 ISW2Q08773 1120 aa5.22□□□□□ -1.57
snR47snR47 YGL015CP33199 130 aa5.18□□□□□ -1.58
snR47snR47 RPG1P38249 964 aaKnown RBP5.18□□□□□ -1.58
snR47snR47 MRPL32P25348 183 aa5.08□□□□□ -1.6
snR47snR47 SIS1P25294 352 aaKnown RBP4.81□□□□□ -1.64
snR47snR47 UBP10P53874 792 aaPredicted RBP4.71□□□□□ -1.66
snR47snR47 CDC27P38042 758 aa4.67□□□□□ -1.66
snR47snR47 UBP9P39967 754 aa4.65□□□□□ -1.67
snR47snR47 MAP2P38174 421 aaKnown RBP4.63□□□□□ -1.67
snR47snR47 DRS1P32892 752 aaKnown RBP4.59□□□□□ -1.67
snR47snR47 RSE1Q04693 1361 aaKnown RBP4.55□□□□□ -1.68
snR47snR47 TGL3P40308 642 aa4.52□□□□□ -1.69
snR47snR47 REB1P21538 810 aa4.51□□□□□ -1.69
snR47snR47 TIF4632P39936 914 aaKnown RBP4.48□□□□□ -1.69
snR47snR47 RPL17AP05740 184 aaKnown RBP4.45□□□□□ -1.7
snR47snR47 RPL17BP46990 184 aaKnown RBP4.45□□□□□ -1.7
snR47snR47 YKR023WP36119 530 aaKnown RBP4.43□□□□□ -1.7
snR47snR47 DIP2Q12220 943 aaPredicted RBP4.41□□□□□ -1.7
snR47snR47 SLX5P32828 619 aaKnown RBP4.36□□□□□ -1.71
snR47snR47 SCY1P53009 804 aa4.33□□□□□ -1.72
snR47snR47 TFC8Q12308 588 aa4.33□□□□□ -1.72
snR47snR47 DCD1P06773 312 aa4.27□□□□□ -1.73
snR47snR47 HOP09932 586 aa4.27□□□□□ -1.73
snR47snR47 SPT21P35209 758 aa4.27□□□□□ -1.73
snR47snR47 MST1P07236 462 aa4.26□□□□□ -1.73
snR47snR47 YBL029C-AQ3E756 94 aa4.25□□□□□ -1.73
snR47snR47 AIR2Q12476 344 aaKnown RBP4.21□□□□□ -1.74
snR47snR47 VNX1P42839 908 aa4.2□□□□□ -1.74
snR47snR47 FKH1P40466 484 aa4.17□□□□□ -1.74
snR47snR47 YJL171CP46992 396 aa4.15□□□□□ -1.75
snR47snR47 BCH2P36122 765 aa4.14□□□□□ -1.75
snR47snR47 SPP1Q03012 353 aa4.11□□□□□ -1.75
snR47snR47 YOR238WQ08634 303 aa4.11□□□□□ -1.75
snR47snR47 RGA2Q06407 1009 aa4.1□□□□□ -1.75
snR47snR47 NSR1P27476 414 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
snR47snR47 BMT6Q12291 365 aa4.04□□□□□ -1.76
snR47snR47 TIF11P38912 153 aaKnown RBP4.03□□□□□ -1.76
snR47snR47 AVT3P36062 692 aa4.02□□□□□ -1.77
snR47snR47 WSC3Q12215 556 aa3.99□□□□□ -1.77
snR47snR47 BDF1P35817 686 aa3.98□□□□□ -1.77
snR47snR47 IOC2Q12072 812 aa3.96□□□□□ -1.78
snR47snR47 LDB19Q12502 818 aa3.96□□□□□ -1.78
snR47snR47 EPS1P40557 701 aa3.95□□□□□ -1.78
snR47snR47 YAP5P40574 245 aa3.95□□□□□ -1.78
snR47snR47 ULI1P43604 169 aa3.9□□□□□ -1.79
snR47snR47 RIM101P33400 625 aa3.88□□□□□ -1.79
snR47snR47 RGA1P39083 1007 aa3.85□□□□□ -1.79
snR47snR47 BCK2P33306 851 aa3.84□□□□□ -1.79
snR47snR47 GTT3P39996 337 aa3.84□□□□□ -1.79
snR47snR47 RTG1P32607 177 aa3.8□□□□□ -1.8
snR47snR47 NCR1Q12200 1170 aa3.8□□□□□ -1.8
snR47snR47 EAP1P36041 632 aaKnown RBP3.79□□□□□ -1.8
snR47snR47 MSB4Q12317 492 aa3.79□□□□□ -1.8
snR47snR47 SEC61P32915 480 aa3.77□□□□□ -1.81
snR47snR47 CHL1P22516 861 aaPredicted RBP3.74□□□□□ -1.81
snR47snR47 YNL035CP53962 389 aaKnown RBP3.74□□□□□ -1.81
snR47snR47 TRP5P00931 707 aaKnown RBP3.72□□□□□ -1.81
snR47snR47 XDJ1P39102 459 aa3.71□□□□□ -1.82
snR47snR47 OXP1P28273 1286 aa3.7□□□□□ -1.82
snR47snR47 BBC1P47068 1157 aa3.69□□□□□ -1.82
snR47snR47 PRE3P38624 215 aa3.68□□□□□ -1.82
snR47snR47 YOL036WQ08206 761 aa3.67□□□□□ -1.82
snR47snR47 SAP30P38429 201 aa3.66□□□□□ -1.82
snR47snR47 TFG1P41895 735 aaPredicted RBP3.65□□□□□ -1.83
snR47snR47 DPS1P04802 557 aaKnown RBP3.64□□□□□ -1.83
snR47snR47 SET4P42948 560 aa3.64□□□□□ -1.83
snR47snR47 PIB1Q06651 286 aa3.64□□□□□ -1.83
snR47snR47 AI2P03876 854 aa3.63□□□□□ -1.83
snR47snR47 DAN4P47179 1161 aa3.63□□□□□ -1.83
snR47snR47 SRC1Q03707 834 aa3.63□□□□□ -1.83
snR47snR47 YDL129WQ07555 291 aa3.63□□□□□ -1.83
snR47snR47 VRP1P37370 817 aa3.61□□□□□ -1.83
snR47snR47 PTP3P40048 928 aa3.61□□□□□ -1.83
snR47snR47 YIL055CP40523 627 aaKnown RBP3.59□□□□□ -1.83
snR47snR47 RSM7P47150 247 aa3.59□□□□□ -1.83
snR47snR47 JIP4Q03361 876 aa3.59□□□□□ -1.83
snR47snR47 SAM3Q08986 587 aa3.57□□□□□ -1.84
snR47snR47 ABP1P15891 592 aaKnown RBP3.5□□□□□ -1.85
snR47snR47 VMA1P17255 1071 aaKnown RBP3.5□□□□□ -1.85
snR47snR47 YDR344CQ05510 147 aa3.49□□□□□ -1.85
snR47snR47 PTC4P38089 393 aa3.47□□□□□ -1.85
snR47snR47 DBP1P24784 617 aaKnown RBP3.45□□□□□ -1.86
snR47snR47 YMR1P47147 688 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
snR47snR47 YPL062WQ02781 134 aa3.45□□□□□ -1.86
snR47snR47 PSD2P53037 1138 aaKnown RBP3.44□□□□□ -1.86
snR47snR47 ELP4Q02884 456 aaKnown RBP3.44□□□□□ -1.86
snR47snR47 HTA1P04911 132 aaKnown RBP3.43□□□□□ -1.86
snR47snR47 HTA2P04912 132 aa3.43□□□□□ -1.86
snR47snR47 YEL023CP39992 682 aa3.43□□□□□ -1.86
snR47snR47 MRM1P25270 412 aa3.42□□□□□ -1.86
snR47snR47 VPS29P38759 282 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms