RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W MTC1P47018 478 aaKnown RBP7.4□□□□□ -1.23
CTF4YPR135W FAP1P53971 965 aa7.11□□□□□ -1.27
CTF4YPR135W PRY3P47033 881 aa6.7□□□□□ -1.34
CTF4YPR135W DRS1P32892 752 aaKnown RBP6.56□□□□□ -1.36
CTF4YPR135W AAD16Q02895 342 aa6.46□□□□□ -1.38
CTF4YPR135W PRI1P10363 409 aa6.43□□□□□ -1.38
CTF4YPR135W YCK3P39962 524 aa6.29□□□□□ -1.4
CTF4YPR135W HAA1Q12753 694 aaKnown RBP6.23□□□□□ -1.41
CTF4YPR135W ISW2Q08773 1120 aa6.2□□□□□ -1.42
CTF4YPR135W RPG1P38249 964 aaKnown RBP6.17□□□□□ -1.42
CTF4YPR135W TSR3Q12094 313 aaKnown RBP6.1□□□□□ -1.43
CTF4YPR135W DIP2Q12220 943 aaPredicted RBP5.87□□□□□ -1.47
CTF4YPR135W MRPL32P25348 183 aa5.84□□□□□ -1.47
CTF4YPR135W RSE1Q04693 1361 aaKnown RBP5.77□□□□□ -1.49
CTF4YPR135W YGL015CP33199 130 aa5.68□□□□□ -1.5
CTF4YPR135W RPL17AP05740 184 aaKnown RBP5.64□□□□□ -1.51
CTF4YPR135W RPL17BP46990 184 aaKnown RBP5.64□□□□□ -1.51
CTF4YPR135W REB1P21538 810 aa5.64□□□□□ -1.51
CTF4YPR135W AVT3P36062 692 aa5.53□□□□□ -1.52
CTF4YPR135W CDC27P38042 758 aa5.5□□□□□ -1.53
CTF4YPR135W YKR023WP36119 530 aaKnown RBP5.37□□□□□ -1.55
CTF4YPR135W BUD31P25337 157 aaPredicted RBP5.37□□□□□ -1.55
CTF4YPR135W MAP2P38174 421 aaKnown RBP5.37□□□□□ -1.55
CTF4YPR135W UBP10P53874 792 aaPredicted RBP5.35□□□□□ -1.55
CTF4YPR135W SPT21P35209 758 aa5.34□□□□□ -1.55
CTF4YPR135W DCD1P06773 312 aa5.29□□□□□ -1.56
CTF4YPR135W HOP09932 586 aa5.29□□□□□ -1.56
CTF4YPR135W BFR2Q06631 534 aaKnown RBP5.28□□□□□ -1.56
CTF4YPR135W TFC8Q12308 588 aa5.26□□□□□ -1.57
CTF4YPR135W SCY1P53009 804 aa5.2□□□□□ -1.58
CTF4YPR135W SLX5P32828 619 aaKnown RBP5.14□□□□□ -1.59
CTF4YPR135W TIF4632P39936 914 aaKnown RBP5.14□□□□□ -1.59
CTF4YPR135W SIS1P25294 352 aaKnown RBP5.1□□□□□ -1.59
CTF4YPR135W TGL3P40308 642 aa5.1□□□□□ -1.59
CTF4YPR135W BCH2P36122 765 aa5.08□□□□□ -1.6
CTF4YPR135W UBP9P39967 754 aa5.07□□□□□ -1.6
CTF4YPR135W RIM101P33400 625 aa5.06□□□□□ -1.6
CTF4YPR135W EPS1P40557 701 aa4.93□□□□□ -1.62
CTF4YPR135W BDF1P35817 686 aa4.91□□□□□ -1.62
CTF4YPR135W OXP1P28273 1286 aa4.9□□□□□ -1.62
CTF4YPR135W YBL029C-AQ3E756 94 aa4.87□□□□□ -1.63
CTF4YPR135W PTP3P40048 928 aa4.86□□□□□ -1.63
CTF4YPR135W MST1P07236 462 aa4.84□□□□□ -1.63
CTF4YPR135W YOR238WQ08634 303 aa4.83□□□□□ -1.64
CTF4YPR135W YIL055CP40523 627 aaKnown RBP4.83□□□□□ -1.64
CTF4YPR135W VNX1P42839 908 aa4.78□□□□□ -1.64
CTF4YPR135W BBC1P47068 1157 aa4.76□□□□□ -1.65
CTF4YPR135W WSC3Q12215 556 aa4.76□□□□□ -1.65
CTF4YPR135W NSR1P27476 414 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
CTF4YPR135W RSM7P47150 247 aa4.75□□□□□ -1.65
CTF4YPR135W YAP5P40574 245 aa4.75□□□□□ -1.65
CTF4YPR135W SPP1Q03012 353 aa4.75□□□□□ -1.65
CTF4YPR135W AI2P03876 854 aa4.74□□□□□ -1.65
CTF4YPR135W YAH1Q12184 172 aaKnown RBP4.74□□□□□ -1.65
CTF4YPR135W GTT3P39996 337 aa4.68□□□□□ -1.66
CTF4YPR135W AIR2Q12476 344 aaKnown RBP4.67□□□□□ -1.66
CTF4YPR135W TIF11P38912 153 aaKnown RBP4.66□□□□□ -1.66
CTF4YPR135W FKH1P40466 484 aa4.66□□□□□ -1.66
CTF4YPR135W YJL171CP46992 396 aa4.65□□□□□ -1.67
CTF4YPR135W PIB1Q06651 286 aa4.65□□□□□ -1.67
CTF4YPR135W YLR271WQ06152 274 aa4.61□□□□□ -1.67
CTF4YPR135W LDB19Q12502 818 aa4.61□□□□□ -1.67
CTF4YPR135W ULI1P43604 169 aa4.6□□□□□ -1.67
CTF4YPR135W PSD2P53037 1138 aaKnown RBP4.58□□□□□ -1.68
CTF4YPR135W MRM1P25270 412 aa4.57□□□□□ -1.68
CTF4YPR135W IOC2Q12072 812 aa4.57□□□□□ -1.68
CTF4YPR135W BMT6Q12291 365 aa4.56□□□□□ -1.68
CTF4YPR135W SET4P42948 560 aa4.52□□□□□ -1.69
CTF4YPR135W MSB4Q12317 492 aa4.51□□□□□ -1.69
CTF4YPR135W YOL036WQ08206 761 aa4.5□□□□□ -1.69
CTF4YPR135W RTG1P32607 177 aa4.49□□□□□ -1.69
CTF4YPR135W EAP1P36041 632 aaKnown RBP4.49□□□□□ -1.69
CTF4YPR135W TRP5P00931 707 aaKnown RBP4.48□□□□□ -1.69
CTF4YPR135W YFR006WP43590 535 aa4.48□□□□□ -1.69
CTF4YPR135W DBP1P24784 617 aaKnown RBP4.47□□□□□ -1.69
CTF4YPR135W TFA1P36100 482 aa4.47□□□□□ -1.69
CTF4YPR135W YMR1P47147 688 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CTF4YPR135W NCR1Q12200 1170 aa4.46□□□□□ -1.7
CTF4YPR135W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CTF4YPR135W MON2P48563 1636 aaPredicted RBP4.46□□□□□ -1.7
CTF4YPR135W VPS29P38759 282 aa4.45□□□□□ -1.7
CTF4YPR135W SSP1P38871 571 aa4.45□□□□□ -1.7
CTF4YPR135W CST9Q06032 482 aa4.44□□□□□ -1.7
CTF4YPR135W VMA1P17255 1071 aaKnown RBP4.43□□□□□ -1.7
CTF4YPR135W STS1P38637 319 aa4.43□□□□□ -1.7
CTF4YPR135W YNL035CP53962 389 aaKnown RBP4.43□□□□□ -1.7
CTF4YPR135W SEC61P32915 480 aa4.41□□□□□ -1.7
CTF4YPR135W RTG3P38165 486 aa4.41□□□□□ -1.7
CTF4YPR135W SAM3Q08986 587 aa4.4□□□□□ -1.71
CTF4YPR135W RCR1P38212 213 aa4.38□□□□□ -1.71
CTF4YPR135W SAP30P38429 201 aa4.38□□□□□ -1.71
CTF4YPR135W MGA2P40578 1113 aa4.38□□□□□ -1.71
CTF4YPR135W TFG1P41895 735 aaPredicted RBP4.38□□□□□ -1.71
CTF4YPR135W INO80P53115 1489 aa4.35□□□□□ -1.71
CTF4YPR135W GYP5Q12344 894 aa4.35□□□□□ -1.71
CTF4YPR135W DAN4P47179 1161 aa4.34□□□□□ -1.71
CTF4YPR135W DCW1P36091 449 aa4.33□□□□□ -1.72
CTF4YPR135W JIP4Q03361 876 aa4.33□□□□□ -1.72
CTF4YPR135W YDL129WQ07555 291 aa4.33□□□□□ -1.72
CTF4YPR135W BCK2P33306 851 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms