RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W FAP1P53971 965 aa4.76□□□□□ -1.65
RDS3YPR094W PRY3P47033 881 aa4.49□□□□□ -1.69
RDS3YPR094W MTC1P47018 478 aaKnown RBP4.39□□□□□ -1.71
RDS3YPR094W HAA1Q12753 694 aaKnown RBP4.19□□□□□ -1.74
RDS3YPR094W YCK3P39962 524 aa4.18□□□□□ -1.74
RDS3YPR094W AAD16Q02895 342 aa4.16□□□□□ -1.74
RDS3YPR094W PRI1P10363 409 aa4.09□□□□□ -1.75
RDS3YPR094W TSR3Q12094 313 aaKnown RBP3.82□□□□□ -1.8
RDS3YPR094W ISW2Q08773 1120 aa3.79□□□□□ -1.8
RDS3YPR094W RPG1P38249 964 aaKnown RBP3.76□□□□□ -1.81
RDS3YPR094W BUD31P25337 157 aaPredicted RBP3.74□□□□□ -1.81
RDS3YPR094W YGL015CP33199 130 aa3.74□□□□□ -1.81
RDS3YPR094W DRS1P32892 752 aaKnown RBP3.71□□□□□ -1.82
RDS3YPR094W MRPL32P25348 183 aa3.69□□□□□ -1.82
RDS3YPR094W SIS1P25294 352 aaKnown RBP3.5□□□□□ -1.85
RDS3YPR094W DIP2Q12220 943 aaPredicted RBP3.4□□□□□ -1.87
RDS3YPR094W RSE1Q04693 1361 aaKnown RBP3.38□□□□□ -1.87
RDS3YPR094W UBP9P39967 754 aa3.38□□□□□ -1.87
RDS3YPR094W UBP10P53874 792 aaPredicted RBP3.37□□□□□ -1.87
RDS3YPR094W CDC27P38042 758 aa3.35□□□□□ -1.87
RDS3YPR094W MAP2P38174 421 aaKnown RBP3.33□□□□□ -1.88
RDS3YPR094W RPL17AP05740 184 aaKnown RBP3.31□□□□□ -1.88
RDS3YPR094W REB1P21538 810 aa3.31□□□□□ -1.88
RDS3YPR094W RPL17BP46990 184 aaKnown RBP3.31□□□□□ -1.88
RDS3YPR094W TIF4632P39936 914 aaKnown RBP3.25□□□□□ -1.89
RDS3YPR094W TGL3P40308 642 aa3.25□□□□□ -1.89
RDS3YPR094W YKR023WP36119 530 aaKnown RBP3.22□□□□□ -1.89
RDS3YPR094W AVT3P36062 692 aa3.18□□□□□ -1.9
RDS3YPR094W DCD1P06773 312 aa3.17□□□□□ -1.9
RDS3YPR094W HOP09932 586 aa3.15□□□□□ -1.91
RDS3YPR094W SLX5P32828 619 aaKnown RBP3.15□□□□□ -1.91
RDS3YPR094W SPT21P35209 758 aa3.15□□□□□ -1.91
RDS3YPR094W SCY1P53009 804 aa3.14□□□□□ -1.91
RDS3YPR094W TFC8Q12308 588 aa3.14□□□□□ -1.91
RDS3YPR094W YBL029C-AQ3E756 94 aa3.07□□□□□ -1.92
RDS3YPR094W YJL171CP46992 396 aa3.04□□□□□ -1.92
RDS3YPR094W RGA2Q06407 1009 aa3.04□□□□□ -1.92
RDS3YPR094W BCH2P36122 765 aa3.03□□□□□ -1.92
RDS3YPR094W MST1P07236 462 aa3.01□□□□□ -1.93
RDS3YPR094W VNX1P42839 908 aa3.01□□□□□ -1.93
RDS3YPR094W AIR2Q12476 344 aaKnown RBP3.01□□□□□ -1.93
RDS3YPR094W SPP1Q03012 353 aa2.99□□□□□ -1.93
RDS3YPR094W FKH1P40466 484 aa2.97□□□□□ -1.93
RDS3YPR094W YOR238WQ08634 303 aa2.97□□□□□ -1.93
RDS3YPR094W RIM101P33400 625 aa2.95□□□□□ -1.94
RDS3YPR094W BMT6Q12291 365 aa2.93□□□□□ -1.94
RDS3YPR094W BDF1P35817 686 aa2.92□□□□□ -1.94
RDS3YPR094W EPS1P40557 701 aa2.92□□□□□ -1.94
RDS3YPR094W WSC3Q12215 556 aa2.92□□□□□ -1.94
RDS3YPR094W TIF11P38912 153 aaKnown RBP2.9□□□□□ -1.95
RDS3YPR094W NSR1P27476 414 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
RDS3YPR094W BFR2Q06631 534 aaKnown RBP2.88□□□□□ -1.95
RDS3YPR094W LDB19Q12502 818 aa2.87□□□□□ -1.95
RDS3YPR094W OXP1P28273 1286 aa2.86□□□□□ -1.95
RDS3YPR094W YAP5P40574 245 aa2.85□□□□□ -1.95
RDS3YPR094W ULI1P43604 169 aa2.82□□□□□ -1.96
RDS3YPR094W IOC2Q12072 812 aa2.82□□□□□ -1.96
RDS3YPR094W GTT3P39996 337 aa2.81□□□□□ -1.96
RDS3YPR094W PTP3P40048 928 aa2.79□□□□□ -1.96
RDS3YPR094W BCK2P33306 851 aa2.77□□□□□ -1.97
RDS3YPR094W YIL055CP40523 627 aaKnown RBP2.77□□□□□ -1.97
RDS3YPR094W AI2P03876 854 aa2.76□□□□□ -1.97
RDS3YPR094W BBC1P47068 1157 aa2.76□□□□□ -1.97
RDS3YPR094W RTG1P32607 177 aa2.75□□□□□ -1.97
RDS3YPR094W RSM7P47150 247 aa2.75□□□□□ -1.97
RDS3YPR094W NCR1Q12200 1170 aa2.75□□□□□ -1.97
RDS3YPR094W PIB1Q06651 286 aa2.74□□□□□ -1.97
RDS3YPR094W EAP1P36041 632 aaKnown RBP2.73□□□□□ -1.97
RDS3YPR094W RGA1P39083 1007 aa2.72□□□□□ -1.97
RDS3YPR094W MSB4Q12317 492 aa2.72□□□□□ -1.97
RDS3YPR094W SEC61P32915 480 aa2.71□□□□□ -1.98
RDS3YPR094W YAH1Q12184 172 aaKnown RBP2.7□□□□□ -1.98
RDS3YPR094W CHL1P22516 861 aaPredicted RBP2.69□□□□□ -1.98
RDS3YPR094W YNL035CP53962 389 aaKnown RBP2.69□□□□□ -1.98
RDS3YPR094W TRP5P00931 707 aaKnown RBP2.68□□□□□ -1.98
RDS3YPR094W TFG1P41895 735 aaPredicted RBP2.68□□□□□ -1.98
RDS3YPR094W SET4P42948 560 aa2.67□□□□□ -1.98
RDS3YPR094W SAP30P38429 201 aa2.66□□□□□ -1.98
RDS3YPR094W YOL036WQ08206 761 aa2.66□□□□□ -1.98
RDS3YPR094W XDJ1P39102 459 aa2.65□□□□□ -1.99
RDS3YPR094W PSD2P53037 1138 aaKnown RBP2.65□□□□□ -1.99
RDS3YPR094W YLR271WQ06152 274 aa2.65□□□□□ -1.99
RDS3YPR094W DPS1P04802 557 aaKnown RBP2.64□□□□□ -1.99
RDS3YPR094W MRM1P25270 412 aa2.64□□□□□ -1.99
RDS3YPR094W PRE3P38624 215 aa2.64□□□□□ -1.99
RDS3YPR094W VRP1P37370 817 aa2.62□□□□□ -1.99
RDS3YPR094W DBP1P24784 617 aaKnown RBP2.61□□□□□ -1.99
RDS3YPR094W YFR006WP43590 535 aa2.61□□□□□ -1.99
RDS3YPR094W DAN4P47179 1161 aa2.61□□□□□ -1.99
RDS3YPR094W YDL129WQ07555 291 aa2.61□□□□□ -1.99
RDS3YPR094W VMA1P17255 1071 aaKnown RBP2.6□□□□□ -1.99
RDS3YPR094W VPS29P38759 282 aa2.6□□□□□ -1.99
RDS3YPR094W YMR1P47147 688 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
RDS3YPR094W SAM3Q08986 587 aa2.59□□□□□ -1.99
RDS3YPR094W STS1P38637 319 aa2.58□□□□□ -2
RDS3YPR094W JIP4Q03361 876 aa2.58□□□□□ -2
RDS3YPR094W SRC1Q03707 834 aa2.57□□□□□ -2
RDS3YPR094W YDR344CQ05510 147 aa2.56□□□□□ -2
RDS3YPR094W RTG3P38165 486 aa2.54□□□□□ -2
RDS3YPR094W RCR1P38212 213 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms