RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C MTC1P47018 478 aaKnown RBP16.41■□□□□ 0.22
CCL1YPR025C FAP1P53971 965 aa16.15■□□□□ 0.18
CCL1YPR025C PRY3P47033 881 aa15.22■□□□□ 0.03
CCL1YPR025C AAD16Q02895 342 aa14.56□□□□□ -0.08
CCL1YPR025C PRI1P10363 409 aa14.49□□□□□ -0.09
CCL1YPR025C YCK3P39962 524 aa14.26□□□□□ -0.13
CCL1YPR025C HAA1Q12753 694 aaKnown RBP14.18□□□□□ -0.14
CCL1YPR025C DRS1P32892 752 aaKnown RBP14.17□□□□□ -0.14
CCL1YPR025C ISW2Q08773 1120 aa13.89□□□□□ -0.19
CCL1YPR025C RPG1P38249 964 aaKnown RBP13.77□□□□□ -0.21
CCL1YPR025C TSR3Q12094 313 aaKnown RBP13.65□□□□□ -0.22
CCL1YPR025C MRPL32P25348 183 aa13.14□□□□□ -0.31
CCL1YPR025C YGL015CP33199 130 aa12.91□□□□□ -0.34
CCL1YPR025C DIP2Q12220 943 aaPredicted RBP12.84□□□□□ -0.35
CCL1YPR025C RSE1Q04693 1361 aaKnown RBP12.75□□□□□ -0.37
CCL1YPR025C REB1P21538 810 aa12.5□□□□□ -0.41
CCL1YPR025C RPL17AP05740 184 aaKnown RBP12.43□□□□□ -0.42
CCL1YPR025C RPL17BP46990 184 aaKnown RBP12.43□□□□□ -0.42
CCL1YPR025C BUD31P25337 157 aaPredicted RBP12.35□□□□□ -0.43
CCL1YPR025C CDC27P38042 758 aa12.24□□□□□ -0.45
CCL1YPR025C UBP10P53874 792 aaPredicted RBP12.06□□□□□ -0.48
CCL1YPR025C AVT3P36062 692 aa12.02□□□□□ -0.49
CCL1YPR025C MAP2P38174 421 aaKnown RBP12.01□□□□□ -0.49
CCL1YPR025C YKR023WP36119 530 aaKnown RBP11.91□□□□□ -0.5
CCL1YPR025C SPT21P35209 758 aa11.77□□□□□ -0.53
CCL1YPR025C HOP09932 586 aa11.69□□□□□ -0.54
CCL1YPR025C DCD1P06773 312 aa11.68□□□□□ -0.54
CCL1YPR025C SIS1P25294 352 aaKnown RBP11.67□□□□□ -0.54
CCL1YPR025C TFC8Q12308 588 aa11.67□□□□□ -0.54
CCL1YPR025C TIF4632P39936 914 aaKnown RBP11.6□□□□□ -0.55
CCL1YPR025C UBP9P39967 754 aa11.57□□□□□ -0.56
CCL1YPR025C SCY1P53009 804 aa11.57□□□□□ -0.56
CCL1YPR025C TGL3P40308 642 aa11.53□□□□□ -0.56
CCL1YPR025C SLX5P32828 619 aaKnown RBP11.49□□□□□ -0.57
CCL1YPR025C BFR2Q06631 534 aaKnown RBP11.37□□□□□ -0.59
CCL1YPR025C BCH2P36122 765 aa11.25□□□□□ -0.61
CCL1YPR025C RIM101P33400 625 aa11.09□□□□□ -0.63
CCL1YPR025C YBL029C-AQ3E756 94 aa10.95□□□□□ -0.66
CCL1YPR025C EPS1P40557 701 aa10.9□□□□□ -0.66
CCL1YPR025C MST1P07236 462 aa10.89□□□□□ -0.67
CCL1YPR025C BDF1P35817 686 aa10.87□□□□□ -0.67
CCL1YPR025C YOR238WQ08634 303 aa10.82□□□□□ -0.68
CCL1YPR025C VNX1P42839 908 aa10.76□□□□□ -0.69
CCL1YPR025C SPP1Q03012 353 aa10.69□□□□□ -0.7
CCL1YPR025C OXP1P28273 1286 aa10.68□□□□□ -0.7
CCL1YPR025C NSR1P27476 414 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
CCL1YPR025C TFA1P36100 482 aa10.64□□□□□ -0.71
CCL1YPR025C PTP3P40048 928 aa10.64□□□□□ -0.71
CCL1YPR025C WSC3Q12215 556 aa10.61□□□□□ -0.71
CCL1YPR025C YAP5P40574 245 aa10.6□□□□□ -0.71
CCL1YPR025C YIL055CP40523 627 aaKnown RBP10.58□□□□□ -0.72
CCL1YPR025C YJL171CP46992 396 aa10.55□□□□□ -0.72
CCL1YPR025C AIR2Q12476 344 aaKnown RBP10.55□□□□□ -0.72
CCL1YPR025C BBC1P47068 1157 aa10.52□□□□□ -0.73
CCL1YPR025C FKH1P40466 484 aa10.51□□□□□ -0.73
CCL1YPR025C TIF11P38912 153 aaKnown RBP10.49□□□□□ -0.73
CCL1YPR025C GTT3P39996 337 aa10.43□□□□□ -0.74
CCL1YPR025C AI2P03876 854 aa10.41□□□□□ -0.74
CCL1YPR025C RSM7P47150 247 aa10.4□□□□□ -0.74
CCL1YPR025C LDB19Q12502 818 aa10.35□□□□□ -0.75
CCL1YPR025C BMT6Q12291 365 aa10.31□□□□□ -0.76
CCL1YPR025C ULI1P43604 169 aa10.29□□□□□ -0.76
CCL1YPR025C YAH1Q12184 172 aaKnown RBP10.26□□□□□ -0.77
CCL1YPR025C IOC2Q12072 812 aa10.24□□□□□ -0.77
CCL1YPR025C PIB1Q06651 286 aa10.2□□□□□ -0.78
CCL1YPR025C MSB4Q12317 492 aa10.11□□□□□ -0.79
CCL1YPR025C EAP1P36041 632 aaKnown RBP10.09□□□□□ -0.79
CCL1YPR025C RTG1P32607 177 aa10.05□□□□□ -0.8
CCL1YPR025C YLR271WQ06152 274 aa10□□□□□ -0.81
CCL1YPR025C NCR1Q12200 1170 aa10□□□□□ -0.81
CCL1YPR025C PSD2P53037 1138 aaKnown RBP9.99□□□□□ -0.81
CCL1YPR025C YOL036WQ08206 761 aa9.99□□□□□ -0.81
CCL1YPR025C TRP5P00931 707 aaKnown RBP9.98□□□□□ -0.81
CCL1YPR025C MRM1P25270 412 aa9.98□□□□□ -0.81
CCL1YPR025C SET4P42948 560 aa9.98□□□□□ -0.81
CCL1YPR025C YNL035CP53962 389 aaKnown RBP9.92□□□□□ -0.82
CCL1YPR025C SEC61P32915 480 aa9.91□□□□□ -0.82
CCL1YPR025C YMR1P47147 688 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
CCL1YPR025C TFG1P41895 735 aaPredicted RBP9.82□□□□□ -0.84
CCL1YPR025C DBP1P24784 617 aaKnown RBP9.81□□□□□ -0.84
CCL1YPR025C VMA1P17255 1071 aaKnown RBP9.78□□□□□ -0.84
CCL1YPR025C BCK2P33306 851 aa9.78□□□□□ -0.84
CCL1YPR025C YFR006WP43590 535 aa9.77□□□□□ -0.85
CCL1YPR025C SAP30P38429 201 aa9.75□□□□□ -0.85
CCL1YPR025C VPS29P38759 282 aa9.74□□□□□ -0.85
CCL1YPR025C SAM3Q08986 587 aa9.74□□□□□ -0.85
CCL1YPR025C CHL1P22516 861 aaPredicted RBP9.69□□□□□ -0.86
CCL1YPR025C STS1P38637 319 aa9.69□□□□□ -0.86
CCL1YPR025C DAN4P47179 1161 aa9.69□□□□□ -0.86
CCL1YPR025C RTG3P38165 486 aa9.68□□□□□ -0.86
CCL1YPR025C JIP4Q03361 876 aa9.67□□□□□ -0.86
CCL1YPR025C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
CCL1YPR025C YDL129WQ07555 291 aa9.66□□□□□ -0.86
CCL1YPR025C PRE3P38624 215 aa9.63□□□□□ -0.87
CCL1YPR025C ABP1P15891 592 aaKnown RBP9.61□□□□□ -0.87
CCL1YPR025C CST9Q06032 482 aa9.59□□□□□ -0.87
CCL1YPR025C GYP5Q12344 894 aa9.58□□□□□ -0.88
CCL1YPR025C SSP1P38871 571 aa9.57□□□□□ -0.88
CCL1YPR025C HTA1P04911 132 aaKnown RBP9.56□□□□□ -0.88
CCL1YPR025C HTA2P04912 132 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms