RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeastyeast

Gene RBD2, Length 789 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RBD2YPL246C MTC1P47018 478 aaKnown RBP14.41□□□□□ -0.1
RBD2YPL246C DRS1P32892 752 aaKnown RBP14.16□□□□□ -0.14
RBD2YPL246C FAP1P53971 965 aa13.06□□□□□ -0.32
RBD2YPL246C PRY3P47033 881 aa12.33□□□□□ -0.44
RBD2YPL246C PRI1P10363 409 aa12.21□□□□□ -0.45
RBD2YPL246C DIP2Q12220 943 aaPredicted RBP12.17□□□□□ -0.46
RBD2YPL246C AAD16Q02895 342 aa12.16□□□□□ -0.46
RBD2YPL246C BFR2Q06631 534 aaKnown RBP12.1□□□□□ -0.47
RBD2YPL246C AVT3P36062 692 aa11.91□□□□□ -0.5
RBD2YPL246C YCK3P39962 524 aa11.81□□□□□ -0.52
RBD2YPL246C ISW2Q08773 1120 aa11.81□□□□□ -0.52
RBD2YPL246C RPG1P38249 964 aaKnown RBP11.7□□□□□ -0.54
RBD2YPL246C HAA1Q12753 694 aaKnown RBP11.64□□□□□ -0.55
RBD2YPL246C RSE1Q04693 1361 aaKnown RBP11.57□□□□□ -0.56
RBD2YPL246C TSR3Q12094 313 aaKnown RBP11.46□□□□□ -0.57
RBD2YPL246C TFA1P36100 482 aa11.18□□□□□ -0.62
RBD2YPL246C RPL17AP05740 184 aaKnown RBP11.15□□□□□ -0.62
RBD2YPL246C RPL17BP46990 184 aaKnown RBP11.15□□□□□ -0.62
RBD2YPL246C REB1P21538 810 aa11.05□□□□□ -0.64
RBD2YPL246C MRPL32P25348 183 aa11.01□□□□□ -0.65
RBD2YPL246C YGL015CP33199 130 aa10.71□□□□□ -0.69
RBD2YPL246C SPT21P35209 758 aa10.71□□□□□ -0.69
RBD2YPL246C RIM101P33400 625 aa10.51□□□□□ -0.73
RBD2YPL246C CDC27P38042 758 aa10.44□□□□□ -0.74
RBD2YPL246C YKR023WP36119 530 aaKnown RBP10.43□□□□□ -0.74
RBD2YPL246C TFC8Q12308 588 aa10.23□□□□□ -0.77
RBD2YPL246C HOP09932 586 aa10.22□□□□□ -0.77
RBD2YPL246C UBP10P53874 792 aaPredicted RBP10.22□□□□□ -0.77
RBD2YPL246C OXP1P28273 1286 aa10.16□□□□□ -0.78
RBD2YPL246C DCD1P06773 312 aa10.14□□□□□ -0.79
RBD2YPL246C MAP2P38174 421 aaKnown RBP10.13□□□□□ -0.79
RBD2YPL246C YIL055CP40523 627 aaKnown RBP10.05□□□□□ -0.8
RBD2YPL246C BUD31P25337 157 aaPredicted RBP10.01□□□□□ -0.81
RBD2YPL246C PTP3P40048 928 aa9.99□□□□□ -0.81
RBD2YPL246C YAH1Q12184 172 aaKnown RBP9.97□□□□□ -0.81
RBD2YPL246C SGS1P35187 1447 aa9.93□□□□□ -0.82
RBD2YPL246C BCH2P36122 765 aa9.92□□□□□ -0.82
RBD2YPL246C SSP1P38871 571 aa9.91□□□□□ -0.82
RBD2YPL246C RSM7P47150 247 aa9.88□□□□□ -0.83
RBD2YPL246C SCY1P53009 804 aa9.84□□□□□ -0.83
RBD2YPL246C YLR271WQ06152 274 aa9.83□□□□□ -0.84
RBD2YPL246C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.79□□□□□ -0.84not detected
RBD2YPL246C TGL3P40308 642 aa9.78□□□□□ -0.84
RBD2YPL246C SLX5P32828 619 aaKnown RBP9.75□□□□□ -0.85
RBD2YPL246C TIF4632P39936 914 aaKnown RBP9.74□□□□□ -0.85
RBD2YPL246C AI2P03876 854 aa9.73□□□□□ -0.85
RBD2YPL246C EPS1P40557 701 aa9.73□□□□□ -0.85
RBD2YPL246C BBC1P47068 1157 aa9.71□□□□□ -0.86
RBD2YPL246C INO80P53115 1489 aa9.69□□□□□ -0.86
RBD2YPL246C SPA2P23201 1466 aaKnown RBP9.67□□□□□ -0.86
RBD2YPL246C BDF1P35817 686 aa9.67□□□□□ -0.86
RBD2YPL246C SSN2P38931 1420 aa9.62□□□□□ -0.87
RBD2YPL246C PSD2P53037 1138 aaKnown RBP9.6□□□□□ -0.87
RBD2YPL246C MGA2P40578 1113 aa9.59□□□□□ -0.87
RBD2YPL246C UBP9P39967 754 aa9.52□□□□□ -0.89
RBD2YPL246C TCB3Q03640 1545 aaKnown RBP9.51□□□□□ -0.89
RBD2YPL246C CST9Q06032 482 aa9.51□□□□□ -0.89
RBD2YPL246C TY1B-DR4Q07793 1604 aa9.49□□□□□ -0.89
RBD2YPL246C MRM1P25270 412 aa9.41□□□□□ -0.9
RBD2YPL246C SIS1P25294 352 aaKnown RBP9.4□□□□□ -0.9
RBD2YPL246C MST1P07236 462 aa9.39□□□□□ -0.91
RBD2YPL246C HSL1P34244 1518 aa9.33□□□□□ -0.92
RBD2YPL246C NSR1P27476 414 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
RBD2YPL246C RTG3P38165 486 aa9.28□□□□□ -0.92
RBD2YPL246C MON2P48563 1636 aaPredicted RBP9.27□□□□□ -0.93
RBD2YPL246C SPT6P23615 1451 aaKnown RBP9.25□□□□□ -0.93
RBD2YPL246C YOR238WQ08634 303 aa9.23□□□□□ -0.93
RBD2YPL246C YAP5P40574 245 aa9.21□□□□□ -0.94
RBD2YPL246C RCR1P38212 213 aa9.2□□□□□ -0.94
RBD2YPL246C VPS29P38759 282 aa9.19□□□□□ -0.94
RBD2YPL246C RQC2Q12532 1038 aaKnown RBP9.17□□□□□ -0.94
RBD2YPL246C HIR3P47171 1648 aa9.16□□□□□ -0.94
RBD2YPL246C SWR1Q05471 1514 aa9.16□□□□□ -0.94
RBD2YPL246C YBL029C-AQ3E756 94 aa9.16□□□□□ -0.94
RBD2YPL246C YMR1P47147 688 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
RBD2YPL246C RAM2P29703 316 aa9.13□□□□□ -0.95
RBD2YPL246C VNX1P42839 908 aa9.1□□□□□ -0.95
RBD2YPL246C DBP1P24784 617 aaKnown RBP9.08□□□□□ -0.96
RBD2YPL246C DMA1P38823 416 aa9.08□□□□□ -0.96
RBD2YPL246C XRN1P22147 1528 aaKnown RBP9.08□□□□□ -0.96
RBD2YPL246C STS1P38637 319 aa9.06□□□□□ -0.96
RBD2YPL246C PIB1Q06651 286 aa9.06□□□□□ -0.96
RBD2YPL246C YFR006WP43590 535 aa9.05□□□□□ -0.96
RBD2YPL246C MAK11P20484 414 aaKnown RBP9.03□□□□□ -0.96
RBD2YPL246C REV3P14284 1504 aa9.01□□□□□ -0.97
RBD2YPL246C GTT3P39996 337 aa8.98□□□□□ -0.97
RBD2YPL246C SIN3P22579 1536 aa8.97□□□□□ -0.97
RBD2YPL246C SPP1Q03012 353 aa8.97□□□□□ -0.97
RBD2YPL246C VMA1P17255 1071 aaKnown RBP8.93□□□□□ -0.98
RBD2YPL246C THO2P53552 1597 aaKnown RBP8.93□□□□□ -0.98
RBD2YPL246C SSK2P53599 1579 aa8.93□□□□□ -0.98
RBD2YPL246C WSC3Q12215 556 aa8.92□□□□□ -0.98
RBD2YPL246C COQ8P27697 501 aa8.9□□□□□ -0.98
RBD2YPL246C MIF2P35201 549 aa8.9□□□□□ -0.98
RBD2YPL246C TIF11P38912 153 aaKnown RBP8.9□□□□□ -0.98
RBD2YPL246C AIR2Q12476 344 aaKnown RBP8.88□□□□□ -0.99
RBD2YPL246C SET1P38827 1080 aaKnown RBP8.87□□□□□ -0.99
RBD2YPL246C FKH1P40466 484 aa8.86□□□□□ -0.99
RBD2YPL246C SAM3Q08986 587 aa8.86□□□□□ -0.99
RBD2YPL246C EDS1P38073 919 aa8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms